Difference between revisions of "HOMOCYSMETB12-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-715 RXN-715] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
 
(Created page with "Category:Gene == Gene Tiso_gene_16113 == * left end position: ** 3574 * transcription direction: ** POSITIVE * right end position: ** 5154 * centisome position: ** 48.1217...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-715 RXN-715] ==
+
== Gene Tiso_gene_16113 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3574
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/1.14.13 EC-1.14.13]
+
** POSITIVE
 +
* right end position:
 +
** 5154
 +
* centisome position:
 +
** 48.12172   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[ACYLCOADEHYDROG-RXN]]
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-713]][c] '''=>''' 1 [[CPD-714]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***automated-name-match
−
** 1 oxygen[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 6-oxocampestanol[c] '''=>''' 1 cathasterone[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_3577]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_8263]]
+
* [[BCor]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[IVCDH]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
== Pathways  ==
+
* [[MCDH]]
−
* [[PWY-699]], brassinosteroid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699]
+
** [[pantograph]]-[[creinhardtii]]
−
** '''11''' reactions found over '''25''' reactions in the full pathway
+
* [[MCDH_2mb2coa]]
−
== Reconstruction information  ==
+
** [[pantograph]]-[[creinhardtii]]
−
* [[orthology]]:
+
* [[RXN-17775]]
−
** [[pantograph]]:
+
** in-silico_annotation
−
*** [[esiliculosus]]
+
***automated-name-match
 +
* [[RXN-17779]]
 +
** in-silico_annotation
 +
***automated-name-match
 +
* [[RXN-17783]]
 +
** in-silico_annotation
 +
***automated-name-match
 +
* [[RXN-17784]]
 +
** in-silico_annotation
 +
***automated-name-match
 +
* [[RXN-17788]]
 +
** in-silico_annotation
 +
***automated-name-match
 +
* [[RXN-17792]]
 +
** in-silico_annotation
 +
***automated-name-match
 +
* [[RXN-17796]]
 +
** in-silico_annotation
 +
***automated-name-match
 +
== Pathways associated ==
 +
* [[FAO-PWY]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=3574}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07430 R07430]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=5154}}
−
{{#set: ec number=EC-1.14.13}}
+
{{#set: centisome position=48.12172    }}
−
{{#set: gene associated=Tiso_gene_3577|Tiso_gene_8263}}
+
{{#set: reaction associated=ACYLCOADEHYDROG-RXN|BCor|IVCDH|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|MCDH|MCDH_2mb2coa|RXN-17775|RXN-17779|RXN-17783|RXN-17784|RXN-17788|RXN-17792|RXN-17796}}
−
{{#set: in pathway=PWY-699}}
+
{{#set: pathway associated=FAO-PWY}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+

Revision as of 17:36, 10 January 2018

Gene Tiso_gene_16113

  • left end position:
    • 3574
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5154
  • centisome position:
    • 48.12172
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=HOMOCYSMETB12-RXN&oldid=18663"