Difference between revisions of "2-DEOXYRIBOSE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ADP reductase ** ri...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2160 == * left end position: ** 15854 * transcription direction: ** NEGATIVE * right end position: ** 16906 * centisome position: ** 77.677...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] ==
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== Gene Tiso_gene_2160 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 15854
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* common name:
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* transcription direction:
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** ADP reductase
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** NEGATIVE
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** ribonucleoside-diphosphate_reductase
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* right end position:
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* ec number:
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** 16906
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** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
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* centisome position:
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** 77.677605   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PYRIMSYN3-RXN]]
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** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[ADP]][c] '''=>''' 1 [[DADP]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[WATER]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 a reduced thioredoxin[c] '''+''' 1 ADP[c] '''=>''' 1 dADP[c] '''+''' 1 an oxidized thioredoxin[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10617]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9916]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
 
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10138]]
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* [[RXN-12610]]
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** in-silico_annotation
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***ec-number
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* [[RXN-12611]]
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** in-silico_annotation
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***ec-number
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* [[THI-P-SYN-RXN]]
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** in-silico_annotation
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***ec-number
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
 
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9915]]
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== Pathways associated ==
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-6907]]
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***EC-NUMBER
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* [[PWY-6890]]
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== Pathways ==
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* [[PWY-7356]]
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* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
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* [[PWY-7357]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6894]]
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* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
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* [[PWY-6897]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7282]]
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== Reconstruction information  ==
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* [[PWY-6908]]
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* [[orthology]]:
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* [[PWY-6893]]
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** [[pantograph]]:
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* [[PWY-6910]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=15854}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28034 28034]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=16906}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02017 R02017]
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{{#set: centisome position=77.677605    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=PYRIMSYN3-RXN|RXN-12610|RXN-12611|THI-P-SYN-RXN}}
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{{#set: common name=ADP reductase}}
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{{#set: pathway associated=PWY-6907|PWY-6890|PWY-7356|PWY-7357|PWY-6894|PWY-6897|PWY-7282|PWY-6908|PWY-6893|PWY-6910}}
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{{#set: common name=ribonucleoside-diphosphate_reductase}}
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{{#set: ec number=EC-1.17.4.1}}
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{{#set: gene associated=Tiso_gene_10617|Tiso_gene_9916|Tiso_gene_10138|Tiso_gene_9915}}
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{{#set: in pathway=PWY-7220|PWY-7227}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:37, 10 January 2018

Gene Tiso_gene_2160

  • left end position:
    • 15854
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 16906
  • centisome position:
    • 77.677605
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=2-DEOXYRIBOSE&oldid=18685"