Difference between revisions of "CPD-710"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] == * direction:...")
 
(Created page with "Category:Gene == Gene Tiso_gene_14247 == * left end position: ** 191 * transcription direction: ** POSITIVE * right end position: ** 1654 * centisome position: ** 3.320007...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] ==
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== Gene Tiso_gene_14247 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 191
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* common name:
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* transcription direction:
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** acetylornithine_aminotransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.6.1.44 EC-2.6.1.44]
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** 1654
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* centisome position:
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** 3.320007   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[SUCROSE-PHOSPHATE-SYNTHASE-RXN]]
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** 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[GLYOX]][c] '''<=>''' 1 [[GLY]][c] '''+''' 1 [[PYRUVATE]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 L-alanine[c] '''+''' 1 glyoxylate[c] '''<=>''' 1 glycine[c] '''+''' 1 pyruvate[c]
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== Pathways associated ==
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* [[PWY-7238]]
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== Genes associated with this reaction  ==
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* [[PWY-7347]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[SUCSYN-PWY]]
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* [[Tiso_gene_11231]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6134]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5726]]
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** [[pantograph]]-[[athaliana]]
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== Pathways ==
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* [[GLYSYN-ALA-PWY]], glycine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLYSYN-ALA-PWY GLYSYN-ALA-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=191}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24248 24248]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1654}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00369 R00369]
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{{#set: centisome position=3.320007    }}
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* UNIPROT:
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{{#set: reaction associated=SUCROSE-PHOSPHATE-SYNTHASE-RXN}}
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** [http://www.uniprot.org/uniprot/P31029 P31029]
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{{#set: pathway associated=PWY-7238|PWY-7347|SUCSYN-PWY}}
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** [http://www.uniprot.org/uniprot/P31030 P31030]
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** [http://www.uniprot.org/uniprot/P41689 P41689]
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** [http://www.uniprot.org/uniprot/Q94055 Q94055]
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** [http://www.uniprot.org/uniprot/Q56YA5 Q56YA5]
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** [http://www.uniprot.org/uniprot/P21549 P21549]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=acetylornithine_aminotransferase}}
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{{#set: ec number=EC-2.6.1.44}}
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{{#set: gene associated=Tiso_gene_11231|Tiso_gene_6134|Tiso_gene_5726}}
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{{#set: in pathway=GLYSYN-ALA-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:37, 10 January 2018

Gene Tiso_gene_14247

  • left end position:
    • 191
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1654
  • centisome position:
    • 3.320007
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-710&oldid=18688"