Difference between revisions of "D-Xylopyranose"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.213-RXN 2.4.1.213-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.or...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROTOPORPHYRIN_IX PROTOPORPHYRIN_IX] == * smiles: ** C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.213-RXN 2.4.1.213-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROTOPORPHYRIN_IX PROTOPORPHYRIN_IX] ==
* direction:
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* smiles:
** REVERSIBLE
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** C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))
* ec number:
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* inchi key:
** [http://enzyme.expasy.org/EC/2.4.1.213 EC-2.4.1.213]
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** InChIKey=KSFOVUSSGSKXFI-UJJXFSCMSA-L
 +
* common name:
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** protoporphyrin IX
 +
* molecular weight:
 +
** 560.651   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[RXN1F-20]]
** 1 [[ADP-D-GLUCOSE]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-18011]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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* [[PROTOPORGENOXI-RXN]]
** 1 ADP-&alpha;-D-glucose[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''<=>''' 1 ADP[c] '''+''' 1 2-O-(&alpha;-D-glucopyranosyl)-sn-glycerol 3-phosphate[c] '''+''' 1 H+[c]
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* [[PPPGO]]
 
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== Reaction(s) of unknown directionality ==
== Genes associated with this reaction  ==
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* [[PROTOHEMEFERROCHELAT-RXN]]
Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18196]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_6869]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_14220]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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== External links  ==
 
== External links  ==
* RHEA:
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* CAS : 553-12-8
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12881 12881]
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* PUBCHEM:
* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=3794562 3794562]
** [http://www.genome.jp/dbget-bin/www_bget?R05328 R05328]
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* HMDB : HMDB00241
{{#set: direction=REVERSIBLE}}
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* LIGAND-CPD:
{{#set: ec number=EC-2.4.1.213}}
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** [http://www.genome.jp/dbget-bin/www_bget?C02191 C02191]
{{#set: gene associated=Tiso_gene_18196|Tiso_gene_6869|Tiso_gene_14220}}
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* CHEMSPIDER:
{{#set: in pathway=}}
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** [http://www.chemspider.com/Chemical-Structure.20171337.html 20171337]
{{#set: reconstruction category=orthology}}
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* CHEBI:
{{#set: reconstruction tool=pantograph}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57306 57306]
{{#set: reconstruction source=synechocystis}}
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* BIGG : ppp9
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{{#set: smiles=C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))}}
 +
{{#set: inchi key=InChIKey=KSFOVUSSGSKXFI-UJJXFSCMSA-L}}
 +
{{#set: common name=protoporphyrin IX}}
 +
{{#set: molecular weight=560.651    }}
 +
{{#set: consumed by=RXN1F-20}}
 +
{{#set: produced by=PROTOPORGENOXI-RXN|PPPGO}}
 +
{{#set: consumed or produced by=PROTOHEMEFERROCHELAT-RXN}}

Revision as of 15:33, 10 January 2018

Metabolite PROTOPORPHYRIN_IX

  • smiles:
    • C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))
  • inchi key:
    • InChIKey=KSFOVUSSGSKXFI-UJJXFSCMSA-L
  • common name:
    • protoporphyrin IX
  • molecular weight:
    • 560.651
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))" cannot be used as a page name in this wiki.