Difference between revisions of "CPD-12902"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] == * direction: ** REVERSIBLE * common name: ** ph...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMPSYN-RXN AMPSYN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMPSYN-RXN AMPSYN-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** phosphoribulokinase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.19 EC-2.7.1.19]
+
** [http://enzyme.expasy.org/EC/4.3.2.2 EC-4.3.2.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[RIBULOSE-5P]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[D-RIBULOSE-15-P2]][c]
+
** 1 [[ADENYLOSUCC]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[FUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-ribulose 5-phosphate[c] '''+''' 1 ATP[c] '''<=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 D-ribulose-1,5-bisphosphate[c]
+
** 1 adenylo-succinate[c] '''<=>''' 1 AMP[c] '''+''' 1 fumarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_17637]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[synechocystis]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
+
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
+
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
 
−
** [[pantograph]]:
 
−
*** [[creinhardtii]]
 
−
*** [[synechocystis]]
 
−
*** [[esiliculosus]]
 
−
*** [[athaliana]]
 
 
* [[manual]]:
 
* [[manual]]:
 
** [[primary_network]]
 
** [[primary_network]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19365 19365]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16853 16853]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01523 R01523]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01083 R01083]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P23010 P23010]
+
** [http://www.uniprot.org/uniprot/P21265 P21265]
−
** [http://www.uniprot.org/uniprot/P0AEX5 P0AEX5]
+
** [http://www.uniprot.org/uniprot/Q58339 Q58339]
−
** [http://www.uniprot.org/uniprot/P19923 P19923]
+
** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
−
** [http://www.uniprot.org/uniprot/P19924 P19924]
+
** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
−
** [http://www.uniprot.org/uniprot/P23015 P23015]
+
** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
−
** [http://www.uniprot.org/uniprot/P12033 P12033]
+
** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
−
** [http://www.uniprot.org/uniprot/Q8GRU9 Q8GRU9]
+
** [http://www.uniprot.org/uniprot/O65180 O65180]
−
** [http://www.uniprot.org/uniprot/P09559 P09559]
+
** [http://www.uniprot.org/uniprot/P12047 P12047]
−
** [http://www.uniprot.org/uniprot/P25697 P25697]
+
−
** [http://www.uniprot.org/uniprot/P93681 P93681]
+
−
** [http://www.uniprot.org/uniprot/P19824 P19824]
+
−
** [http://www.uniprot.org/uniprot/P27774 P27774]
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=phosphoribulokinase}}
+
{{#set: ec number=EC-4.3.2.2}}
−
{{#set: ec number=EC-2.7.1.19}}
+
{{#set: in pathway=PWY-7219}}
−
{{#set: gene associated=Tiso_gene_17637}}
+
−
{{#set: in pathway=CALVIN-PWY|PWY-5723}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
+
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction source=primary_network}}
 
{{#set: reconstruction source=primary_network}}

Revision as of 17:39, 10 January 2018

Reaction AMPSYN-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 adenylo-succinate[c] <=> 1 AMP[c] + 1 fumarate[c]

Genes associated with this reaction

Pathways

  • PWY-7219, adenosine ribonucleotides de novo biosynthesis: PWY-7219
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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