Difference between revisions of "Tiso gene 45"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11680 RXN-11680] == * direction: ** LEFT-TO-RIGHT * common name: ** Delta-6 fatty acid desatura...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5151 PWY-5151] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11680 RXN-11680] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5151 PWY-5151] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
−
** Delta-6 fatty acid desaturase
+
** L-tyrosine degradation II
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.14.19.47 EC-1.14.19.47]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''2''' reactions in the full pathway
−
** 1 [[Linoleoyl-groups]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[Gamma-linolenoyl-groups]][c] '''+''' 2 [[WATER]][c]
+
* [[TYROSINE-AMINOTRANSFERASE-RXN]]
−
* With common name(s):
+
** 3 associated gene(s):
−
** 1 a [glycerolipid]-linoleate[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 1 oxygen[c] '''+''' 2 H+[c] '''=>''' 2 a ferricytochrome b5[c] '''+''' 1 a [glycerolipid]-γ-linolenate[c] '''+''' 2 H2O[c]
+
*** [[Tiso_gene_17718]]
−
 
+
*** [[Tiso_gene_10680]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_6815]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 3 reconstruction source(s) associated:
−
* [[Tiso_gene_18205]]
+
*** [[manual-primary_network]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-creinhardtii]]
−
***AUTOMATED-NAME-MATCH
+
*** [[orthology-synechocystis]]
−
* [[Tiso_gene_9580]]
+
== Reaction(s) not found ==
−
** [[pantograph]]-[[esiliculosus]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.2.3.13-RXN 1.2.3.13-RXN]
−
* [[Tiso_gene_7427]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18056]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_8027]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353]
+
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-6603]], dicranin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6603 PWY-6603]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* UM-BBD-PWY : tyr
−
** [http://www.genome.jp/dbget-bin/www_bget?R07063 R07063]
+
{{#set: taxonomic range=TAX-1239}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-201174}}
−
{{#set: common name=Delta-6 fatty acid desaturase}}
+
{{#set: common name=L-tyrosine degradation II}}
−
{{#set: ec number=EC-1.14.19.47}}
+
{{#set: reaction found=1}}
−
{{#set: gene associated=Tiso_gene_18205|Tiso_gene_9580|Tiso_gene_7427|Tiso_gene_18056|Tiso_gene_8027}}
+
{{#set: total reaction=2}}
−
{{#set: in pathway=PWY-5353|PWY-6603}}
+
{{#set: completion rate=50.0}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 17:52, 18 March 2018

Pathway PWY-5151

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links

  • UM-BBD-PWY : tyr




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_45&oldid=20341"