Difference between revisions of "RXN-12575"

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(Created page with "Category:Gene == Gene Tiso_gene_1983 == * left end position: ** 4053 * transcription direction: ** POSITIVE * right end position: ** 19425 * centisome position: ** 19.3867...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16129 RXN-16129] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_1983 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16129 RXN-16129] ==
* left end position:
+
* direction:
** 4053
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
+
** chloroplast_beta-keto_acyl_reductase
* right end position:
+
* ec number:
** 19425
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
* centisome position:
+
** 19.386778   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[ATPASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[NADPH]][c] '''+''' 1 [[CPD-17332]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-17382]][c] '''+''' 1 [[NADP]][c]
***ec-number
+
* With common name(s):
== Pathways associated ==
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** 1 NADPH[c] '''+''' 1 3-oxo-tetracosapentaenoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 (3R)-hydroxy-tetracosapentaenoyl-CoA[c] '''+''' 1 NADP+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_9871]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways ==
 +
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
 +
** '''14''' reactions found over '''14''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=4053}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
{{#set: right end position=19425}}
+
{{#set: ec number=EC-1.1.1.330}}
{{#set: centisome position=19.386778    }}
+
{{#set: gene associated=Tiso_gene_9871}}
{{#set: reaction associated=ATPASE-RXN}}
+
{{#set: in pathway=PWY-7606}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 17:52, 18 March 2018

Reaction RXN-16129

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 3-oxo-tetracosapentaenoyl-CoA[c] + 1 H+[c] => 1 (3R)-hydroxy-tetracosapentaenoyl-CoA[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_9871
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links