Difference between revisions of "Tiso gene 9683"

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(Created page with "Category:Gene == Gene Tiso_gene_3445 == * left end position: ** 9078 * transcription direction: ** NEGATIVE * right end position: ** 11515 * centisome position: ** 54.4277...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase **...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3445 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] ==
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* left end position:
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* direction:
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** 9078
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** acyl-coenzyme_a_oxidase
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* right end position:
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** ORF
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** 11515
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** acyl-_dehydrogenase
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* centisome position:
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** acyl-CoA_dehydrogenase
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** 54.427727   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.8.9 EC-1.3.8.9]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PALMITYL-COA]][c] '''=>''' 1 [[CPD0-2117]][c] '''+''' 1 [[ETF-Reduced]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 palmitoyl-CoA[c] '''=>''' 1 trans-hexadec-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
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* [[PWY-6164]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6475]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5991]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16631]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18566]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_883]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17967]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
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** '''6''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
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** '''6''' reactions found over '''22''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=9078}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
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{{#set: right end position=11515}}
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{{#set: common name=ORF}}
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{{#set: centisome position=54.427727    }}
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{{#set: common name=acyl-_dehydrogenase}}
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{{#set: reaction associated=3-DEHYDROQUINATE-SYNTHASE-RXN}}
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{{#set: common name=acyl-CoA_dehydrogenase}}
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{{#set: pathway associated=PWY-6164}}
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{{#set: ec number=EC-1.3.8.9}}
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{{#set: gene associated=Tiso_gene_6475|Tiso_gene_5991|Tiso_gene_16631|Tiso_gene_18566|Tiso_gene_883|Tiso_gene_17967}}
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{{#set: in pathway=PWY-7654|PWY-7656}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 17:54, 18 March 2018

Reaction RXN-16540

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
    • ORF
    • acyl-_dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 an oxidized electron-transfer flavoprotein[c] + 1 palmitoyl-CoA[c] => 1 trans-hexadec-2-enoyl-CoA[c] + 1 a reduced electron-transfer flavoprotein[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis: PWY-7654
    • 6 reactions found over 11 reactions in the full pathway
  • PWY-7656, Spodoptera littoralis pheromone biosynthesis: PWY-7656
    • 6 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9683&oldid=20568"