Difference between revisions of "DNA-Holder"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydro...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
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** dihydrodipicolinate_synthase
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** phospholipases
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* ec number:
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** [http://enzyme.expasy.org/EC/4.3.3.7 EC-4.3.3.7]
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* Synonym(s):
 
* Synonym(s):
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** dihydropicolinate synthetase
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** phospholipase pathway
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** dihydrodipicolinic acid synthase
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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* '''2''' reaction(s) found
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** 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CPD-14443]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
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** [[PHOSPHOLIPASE-A2-RXN]]
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* With common name(s):
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** [[3.1.4.11-RXN]]
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** 1 L-aspartate-semialdehyde[c] '''+''' 1 pyruvate[c] '''=>''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H+[c] '''+''' 1 H2O[c]
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== Reaction(s) not found ==
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* '''3''' reaction(s) not found
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== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-C-RXN PHOSPHOLIPASE-C-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-A1-RXN PHOSPHOLIPASE-A1-RXN]
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* [[Tiso_gene_14829]]
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** [http://metacyc.org/META/NEW-IMAGE?object=PHOSCHOL-RXN PHOSCHOL-RXN]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ARACYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY]
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** [http://www.genome.jp/dbget-bin/www_bget?R02292 R02292]
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{{#set: taxonomic range=TAX-2759}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P43797 P43797]
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.uniprot.org/uniprot/O26892 O26892]
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{{#set: common name=phospholipases}}
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** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9]
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{{#set: common name=phospholipase pathway}}
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** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/P19808 P19808]
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{{#set: reaction not found=3}}
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** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13]
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** [http://www.uniprot.org/uniprot/O05969 O05969]
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** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61]
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** [http://www.uniprot.org/uniprot/Q04796 Q04796]
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** [http://www.uniprot.org/uniprot/Q57695 Q57695]
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** [http://www.uniprot.org/uniprot/O25657 O25657]
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** [http://www.uniprot.org/uniprot/O67216 O67216]
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** [http://www.uniprot.org/uniprot/O29352 O29352]
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** [http://www.uniprot.org/uniprot/O84366 O84366]
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** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4]
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** [http://www.uniprot.org/uniprot/P63945 P63945]
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** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9]
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** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6]
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** [http://www.uniprot.org/uniprot/Q43038 Q43038]
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** [http://www.uniprot.org/uniprot/P49423 P49423]
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** [http://www.uniprot.org/uniprot/Q55513 Q55513]
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** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2]
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** [http://www.uniprot.org/uniprot/Q42948 Q42948]
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** [http://www.uniprot.org/uniprot/Q42940 Q42940]
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** [http://www.uniprot.org/uniprot/O86841 O86841]
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** [http://www.uniprot.org/uniprot/P24847 P24847]
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** [http://www.uniprot.org/uniprot/P24846 P24846]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=dihydrodipicolinate_synthase}}
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{{#set: ec number=EC-4.3.3.7}}
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{{#set: common name=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}}
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{{#set: gene associated=Tiso_gene_14829}}
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{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:41, 10 January 2018

Pathway LIPASYN-PWY

Reaction(s) found

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DNA-Holder&oldid=10005"