Difference between revisions of "PWY-5022"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO...")
 
(Created page with "Category:Gene == Gene Tiso_gene_1740 == * left end position: ** 13139 * transcription direction: ** POSITIVE * right end position: ** 13824 * centisome position: ** 59.779...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] ==
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== Gene Tiso_gene_1740 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 13139
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.13.11 EC-1.14.13.11]
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** POSITIVE
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* right end position:
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** 13824
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* centisome position:
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** 59.779785   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[5.99.1.2-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-674]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[COUMARATE]][c] '''+''' 1 [[NADP]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 oxygen[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 trans-cinnamate[c] '''=>''' 1 H2O[c] '''+''' 1 4-coumarate[c] '''+''' 1 NADP+[c]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1547]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_8263]]
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** [[pantograph]]-[[athaliana]]
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== Pathways ==
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* [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''9''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=13139}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10608 10608]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=13824}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02253 R02253]
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{{#set: centisome position=59.779785    }}
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* UNIPROT:
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{{#set: reaction associated=5.99.1.2-RXN}}
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** [http://www.uniprot.org/uniprot/Q04468 Q04468]
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** [http://www.uniprot.org/uniprot/P37115 P37115]
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** [http://www.uniprot.org/uniprot/Q9S8R8 Q9S8R8]
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** [http://www.uniprot.org/uniprot/P48522 P48522]
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** [http://www.uniprot.org/uniprot/Q42895 Q42895]
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** [http://www.uniprot.org/uniprot/O81928 O81928]
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** [http://www.uniprot.org/uniprot/O24315 O24315]
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** [http://www.uniprot.org/uniprot/Q43033 Q43033]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.14.13.11}}
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{{#set: gene associated=Tiso_gene_1547|Tiso_gene_8263}}
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{{#set: in pathway=PWY1F-467|PWY-1121}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana}}
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Revision as of 15:41, 10 January 2018

Gene Tiso_gene_1740

  • left end position:
    • 13139
  • transcription direction:
    • POSITIVE
  • right end position:
    • 13824
  • centisome position:
    • 59.779785
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5022&oldid=10029"