Difference between revisions of "PWY-6987"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7985 RXN-7985] == * direction: ** LEFT-TO-RIGHT * common name: ** violaxanthin de-epoxidase **...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-694 CPD-694] == * smiles: ** CC6(=C7(C(C([CH]8(C2([N+]1([Co---]4([N+]3(C(=C(C)C=1C(CCC([O-]...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7985 RXN-7985] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-694 CPD-694] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** CC6(=C7(C(C([CH]8(C2([N+]1([Co---]4([N+]3(C(=C(C)C=1C(CCC([O-])=O)C(CC(=O)N)(C)2)C(C(CCC(=O)[O-])C=3C=C5(C(C)(C)C(CCC(=O)[O-])C(=[N+]45)6))(CC(=O)N)C))N78))C))CC(=O)[O-])(C)CCC(=O)[O-]))
 +
* inchi key:
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** InChIKey=NKLHEMWEQJCPPF-OKJGWHJPSA-H
 
* common name:
 
* common name:
** violaxanthin de-epoxidase
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** cob(I)yrinate a,c-diamide
** violaxanthin_de-_chloroplast
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* molecular weight:
** violaxanthin_de-epoxidase
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** 931.9   
 
* Synonym(s):
 
* Synonym(s):
** VDE
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** cob(I)yrinic acid a,c-diamide
 +
** Cob(I)yrinate diamide
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[R344-RXN]]
** 1 [[ASCORBATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD1F-131]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 1 [[WATER]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1 L-ascorbate[c] '''+''' 1 H+[c] '''+''' 1 antheraxanthin[c] '''=>''' 1 zeaxanthin[c] '''+''' 1 L-dehydro-ascorbate[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16523]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1275]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5666]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-5945]], zeaxanthin, antheraxanthin and violaxanthin interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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* PUBCHEM:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21800 21800]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266689 45266689]
* LIGAND-RXN:
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* CHEBI:
** [http://www.genome.jp/dbget-bin/www_bget?R07179 R07179]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58575 58575]
{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
{{#set: common name=violaxanthin de-epoxidase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C06505 C06505]
{{#set: common name=violaxanthin_de-_chloroplast}}
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* HMDB : HMDB06904
{{#set: common name=violaxanthin_de-epoxidase}}
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{{#set: smiles=CC6(=C7(C(C([CH]8(C2([N+]1([Co---]4([N+]3(C(=C(C)C=1C(CCC([O-])=O)C(CC(=O)N)(C)2)C(C(CCC(=O)[O-])C=3C=C5(C(C)(C)C(CCC(=O)[O-])C(=[N+]45)6))(CC(=O)N)C))N78))C))CC(=O)[O-])(C)CCC(=O)[O-]))}}
{{#set: common name=VDE}}
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{{#set: inchi key=InChIKey=NKLHEMWEQJCPPF-OKJGWHJPSA-H}}
{{#set: gene associated=Tiso_gene_16523|Tiso_gene_1275|Tiso_gene_5666}}
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{{#set: common name=cob(I)yrinate a,c-diamide}}
{{#set: in pathway=PWY-5945}}
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{{#set: molecular weight=931.9    }}
{{#set: reconstruction category=orthology}}
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{{#set: common name=cob(I)yrinic acid a,c-diamide|Cob(I)yrinate diamide}}
{{#set: reconstruction tool=pantograph}}
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{{#set: consumed by=R344-RXN}}
{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 15:43, 10 January 2018

Metabolite CPD-694

  • smiles:
    • CC6(=C7(C(C([CH]8(C2([N+]1([Co---]4([N+]3(C(=C(C)C=1C(CCC([O-])=O)C(CC(=O)N)(C)2)C(C(CCC(=O)[O-])C=3C=C5(C(C)(C)C(CCC(=O)[O-])C(=[N+]45)6))(CC(=O)N)C))N78))C))CC(=O)[O-])(C)CCC(=O)[O-]))
  • inchi key:
    • InChIKey=NKLHEMWEQJCPPF-OKJGWHJPSA-H
  • common name:
    • cob(I)yrinate a,c-diamide
  • molecular weight:
    • 931.9
  • Synonym(s):
    • cob(I)yrinic acid a,c-diamide
    • Cob(I)yrinate diamide

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC6(=C7(C(C([CH]8(C2([N+]1([Co---]4([N+]3(C(=C(C)C=1C(CCC([O-])=O)C(CC(=O)N)(C)2)C(C(CCC(=O)[O-])C=3C=C5(C(C)(C)C(CCC(=O)[O-])C(=[N+]45)6))(CC(=O)N)C))N78))C))CC(=O)[O-])(C)CCC(=O)[O-]))" cannot be used as a page name in this wiki.