Difference between revisions of "Tiso gene 16209"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7908 RXN-7908] == * direction: ** LEFT-TO-RIGHT * common name: ** transcriptional_coactivator_p...")
 
(Created page with "Category:Gene == Gene Tiso_gene_3358 == * left end position: ** 11372 * transcription direction: ** NEGATIVE * right end position: ** 14939 * centisome position: ** 67.218...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7908 RXN-7908] ==
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== Gene Tiso_gene_3358 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 11372
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* common name:
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* transcription direction:
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** transcriptional_coactivator_pterin_dehydratase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.2.1.96 EC-4.2.1.96]
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** 14939
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* centisome position:
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** 67.218346   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[5-OXOPROLINASE-ATP-HYDROLYSING-RXN]]
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** 1 [[CPD-5881]][c] '''=>''' 1 [[BIOPTERIN]][c] '''+''' 1 [[WATER]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 4α-hydroxy-tetrahydrobiopterin[c] '''=>''' 1 7,8-dihydrobiopterin[c] '''+''' 1 H2O[c]
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== Pathways associated ==
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* [[PWY-4041]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14844]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14845]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PHENYLALANINE-DEG1-PWY]], L-phenylalanine degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-DEG1-PWY PHENYLALANINE-DEG1-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=11372}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11920 11920]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=14939}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04734 R04734]
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{{#set: centisome position=67.218346    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=5-OXOPROLINASE-ATP-HYDROLYSING-RXN}}
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{{#set: common name=transcriptional_coactivator_pterin_dehydratase}}
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{{#set: pathway associated=PWY-4041}}
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{{#set: ec number=EC-4.2.1.96}}
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{{#set: gene associated=Tiso_gene_14844|Tiso_gene_14845}}
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{{#set: in pathway=PHENYLALANINE-DEG1-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 15:44, 10 January 2018

Gene Tiso_gene_3358

  • left end position:
    • 11372
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 14939
  • centisome position:
    • 67.218346
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16209&oldid=10231"