Difference between revisions of "Tiso gene 15422"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-66 RXN1F-66] == * direction: ** REVERSIBLE * common name: ** chlorophyll_chloroplastic * ec n...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.31-RXN 1.2.1.31-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-66 RXN1F-66] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.31-RXN 1.2.1.31-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** chlorophyll_chloroplastic
+
** polyketide_synthase
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.62 EC-2.5.1.62]
+
** [http://enzyme.expasy.org/EC/1.2.1.31 EC-1.2.1.31]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[CHLOROPHYLL-A]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[ALLYSINE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[CPD-468]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 phytyl diphosphate[c] '''+''' 1 chlorophyllide a[c] '''+''' 1 H+[c] '''<=>''' 1 diphosphate[c] '''+''' 1 chlorophyll a[c]
+
** 1 H2O[c] '''+''' 1 (S)-2-amino-6-oxohexanoate[c] '''+''' 1 NAD(P)+[c] '''=>''' 2 H+[c] '''+''' 1 L-2-aminoadipate[c] '''+''' 1 NAD(P)H[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_19542]]
+
* [[Tiso_gene_5425]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6563]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_16719]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5424]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6562]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
+
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7764]], chlorophyll a biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7764 PWY-7764]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-5086]], chlorophyll a biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5086 PWY-5086]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
 
−
** [[pantograph]]:
 
−
*** [[creinhardtii]]
 
−
*** [[esiliculosus]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17317 17317]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12306 12306]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06284 R06284]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03103 R03103]
−
{{#set: direction=REVERSIBLE}}
+
* UNIPROT:
−
{{#set: common name=chlorophyll_chloroplastic}}
+
** [http://www.uniprot.org/uniprot/P50113 P50113]
−
{{#set: ec number=EC-2.5.1.62}}
+
** [http://www.uniprot.org/uniprot/P07702 P07702]
−
{{#set: gene associated=Tiso_gene_19542}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=PWY-5068|PWY-7764|PWY-5086}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=ORF}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec number=EC-1.2.1.31}}
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+
{{#set: gene associated=Tiso_gene_5425|Tiso_gene_6563|Tiso_gene_16719|Tiso_gene_5424|Tiso_gene_6562}}
 +
{{#set: in pathway=LYSINE-DEG1-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:45, 10 January 2018

Reaction 1.2.1.31-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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