Difference between revisions of "PWY-6855"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOLOCYTOCHROME-C-SYNTHASE-RXN HOLOCYTOCHROME-C-SYNTHASE-RXN] == * direction: ** REVERSIBLE * common...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERKIN-RXN HOMOSERKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** homoserine_kinase...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOLOCYTOCHROME-C-SYNTHASE-RXN HOLOCYTOCHROME-C-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERKIN-RXN HOMOSERKIN-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** holocytochrome_c_synthase
+
** homoserine_kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.4.1.17 EC-4.4.1.17]
+
** [http://enzyme.expasy.org/EC/2.7.1.39 EC-2.7.1.39]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Cytochromes-c]][c] '''<=>''' 1 [[Apocytochromes-c]][c] '''+''' 1 [[HEME_C]][c]
+
** 1 [[HOMO-SER]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a c-type cytochrome[c] '''<=>''' 1 an apo-[c-type cytochrome][c] '''+''' 1 heme c[c]
+
** 1 L-homoserine[c] '''+''' 1 ATP[c] '''=>''' 1 O-phospho-L-homoserine[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_20060]]
+
* [[Tiso_gene_17704]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_17705]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[synechocystis]]
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[manual]]:
 +
** [[primary_network]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
Line 33: Line 48:
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13985 13985]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02480 R02480]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01771 R01771]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P06182 P06182]
+
** [http://www.uniprot.org/uniprot/P27722 P27722]
−
** [http://www.uniprot.org/uniprot/P14187 P14187]
+
** [http://www.uniprot.org/uniprot/Q9PIZ3 Q9PIZ3]
−
** [http://www.uniprot.org/uniprot/O25044 O25044]
+
** [http://www.uniprot.org/uniprot/P04948 P04948]
−
** [http://www.uniprot.org/uniprot/O83139 O83139]
+
** [http://www.uniprot.org/uniprot/Q9UZV7 Q9UZV7]
−
** [http://www.uniprot.org/uniprot/P45706 P45706]
+
** [http://www.uniprot.org/uniprot/Q9CGD7 Q9CGD7]
−
** [http://www.uniprot.org/uniprot/Q9ZMH0 Q9ZMH0]
+
** [http://www.uniprot.org/uniprot/P44504 P44504]
−
** [http://www.uniprot.org/uniprot/P44202 P44202]
+
** [http://www.uniprot.org/uniprot/P52991 P52991]
−
** [http://www.uniprot.org/uniprot/P53701 P53701]
+
** [http://www.uniprot.org/uniprot/P00547 P00547]
−
** [http://www.uniprot.org/uniprot/Q00873 Q00873]
+
** [http://www.uniprot.org/uniprot/P07128 P07128]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/P17423 P17423]
−
{{#set: common name=holocytochrome_c_synthase}}
+
** [http://www.uniprot.org/uniprot/P73646 P73646]
−
{{#set: ec number=EC-4.4.1.17}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=Tiso_gene_20060}}
+
{{#set: common name=homoserine_kinase}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-2.7.1.39}}
 +
{{#set: gene associated=Tiso_gene_17704|Tiso_gene_17705}}
 +
{{#set: in pathway=PWY-702|HOMOSER-THRESYN-PWY}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 15:45, 10 January 2018

Reaction HOMOSERKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • homoserine_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6855&oldid=10277"