Difference between revisions of "Tiso gene 1584"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5285 RXN-5285] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** protochlorophyllide_re...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5285 RXN-5285] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** coumarins biosynthesis (engineered)
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** ORF
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** protochlorophyllide_reductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.1.33 EC-1.3.1.33]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''3''' reaction(s) found
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* With identifiers:
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** [[RXN-1126]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[DIVINYL-PROTOCHLOROPHYLLIDE-A]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[DIVINYLCHLOROPHYLLIDE-A]][c]
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** [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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* With common name(s):
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** [[4-COUMARATE--COA-LIGASE-RXN]]
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 3,8-divinyl protochlorophyllide a[c] '''=>''' 1 NADP+[c] '''+''' 1 3,8-divinyl chlorophyllide a[c]
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== Reaction(s) not found ==
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* '''10''' reaction(s) not found
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== Genes associated with this reaction ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12963 RXN-12963]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16762 RXN-16762]
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* [[Tiso_gene_10077]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16763 RXN-16763]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12350 RXN-12350]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12349 RXN-12349]
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** EXPERIMENTAL_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-9697 RXN-9697]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14987 RXN-14987]
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** [[pantograph]]-[[esiliculosus]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14990 RXN-14990]
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* [[Tiso_gene_19518]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12965 RXN-12965]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14988 RXN-14988]
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17141]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06286 R06286]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=coumarins biosynthesis (engineered)}}
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{{#set: common name=ORF}}
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{{#set: reaction found=3}}
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{{#set: common name=protochlorophyllide_reductase}}
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{{#set: reaction not found=10}}
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{{#set: ec number=EC-1.3.1.33}}
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{{#set: gene associated=Tiso_gene_10077|Tiso_gene_19518|Tiso_gene_17141}}
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{{#set: in pathway=CHLOROPHYLL-SYN}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 15:46, 10 January 2018

Reaction RXN-5285

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • protochlorophyllide_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links








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