Difference between revisions of "8-AMINO-7-OXONONANOATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVIN-SYN-RXN RIBOFLAVIN-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enz...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROSPHINGANINE-REDUCTASE-RXN 3-DEHYDROSPHINGANINE-REDUCTASE-RXN] == * direction: ** LEFT-TO-R...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVIN-SYN-RXN RIBOFLAVIN-SYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROSPHINGANINE-REDUCTASE-RXN 3-DEHYDROSPHINGANINE-REDUCTASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 3-ketodihydrosphingosine_reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.9 EC-2.5.1.9]
+
** [http://enzyme.expasy.org/EC/1.1.1.102 EC-1.1.1.102]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''+''' 1 [[RIBOFLAVIN]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-13612]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 6,7-dimethyl-8-(1-D-ribityl)lumazine[c] '''+''' 1 H+[c] '''=>''' 1 5-amino-6-(D-ribitylamino)uracil[c] '''+''' 1 riboflavin[c]
+
** 1 H+[c] '''+''' 1 3-dehydrosphinganine[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 D-erythro-sphinganine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13686]]
+
* [[Tiso_gene_18518]]
−
** [[pantograph]]-[[athaliana]]
+
** IN-SILICO_ANNOTATION
−
** [[pantograph]]-[[synechocystis]]
+
***AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
 
** [[pantograph]]-[[creinhardtii]]
 
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
+
* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
+
* [[PWY3DJ-12]], ceramide de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
+
* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[creinhardtii]]
 
*** [[creinhardtii]]
−
*** [[synechocystis]]
+
* [[annotation]]:
−
*** [[athaliana]]
+
** [[pathwaytools]]:
−
*** [[esiliculosus]]
+
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20772 20772]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22640 22640]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00066 R00066]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02978 R02978]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P11998 P11998]
+
−
** [http://www.uniprot.org/uniprot/P16440 P16440]
+
−
** [http://www.uniprot.org/uniprot/Q9JUA6 Q9JUA6]
+
−
** [http://www.uniprot.org/uniprot/O24854 O24854]
+
−
** [http://www.uniprot.org/uniprot/O26237 O26237]
+
−
** [http://www.uniprot.org/uniprot/P66037 P66037]
+
−
** [http://www.uniprot.org/uniprot/Q9CGU8 Q9CGU8]
+
−
** [http://www.uniprot.org/uniprot/Q9YDC5 Q9YDC5]
+
−
** [http://www.uniprot.org/uniprot/Q9PN77 Q9PN77]
+
−
** [http://www.uniprot.org/uniprot/Q9CGU6 Q9CGU6]
+
−
** [http://www.uniprot.org/uniprot/P45273 P45273]
+
−
** [http://www.uniprot.org/uniprot/Q9PIB9 Q9PIB9]
+
−
** [http://www.uniprot.org/uniprot/O66529 O66529]
+
−
** [http://www.uniprot.org/uniprot/Q58584 Q58584]
+
−
** [http://www.uniprot.org/uniprot/O28856 O28856]
+
−
** [http://www.uniprot.org/uniprot/Q01994 Q01994]
+
−
** [http://www.uniprot.org/uniprot/P61714 P61714]
+
−
** [http://www.uniprot.org/uniprot/P0AFU8 P0AFU8]
+
−
** [http://www.uniprot.org/uniprot/P38145 P38145]
+
−
** [http://www.uniprot.org/uniprot/Q55532 Q55532]
+
−
** [http://www.uniprot.org/uniprot/P73527 P73527]
+
−
** [http://www.uniprot.org/uniprot/Q44680 Q44680]
+
−
** [http://www.uniprot.org/uniprot/Q44681 Q44681]
+
−
** [http://www.uniprot.org/uniprot/P50854 P50854]
+
−
** [http://www.uniprot.org/uniprot/P50856 P50856]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.5.1.9}}
+
{{#set: common name=3-ketodihydrosphingosine_reductase}}
−
{{#set: gene associated=Tiso_gene_13686}}
+
{{#set: ec number=EC-1.1.1.102}}
−
{{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}}
+
{{#set: gene associated=Tiso_gene_18518}}
 +
{{#set: in pathway=PWY-5129|PWY3DJ-12|SPHINGOLIPID-SYN-PWY}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
+
{{#set: reconstruction source=creinhardtii}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 15:47, 10 January 2018

Reaction 3-DEHYDROSPHINGANINE-REDUCTASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-ketodihydrosphingosine_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 3-dehydrosphinganine[c] + 1 NADPH[c] => 1 NADP+[c] + 1 D-erythro-sphinganine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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