Difference between revisions of "1.2.1.65-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.60-RXN 2.7.7.60-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-c-methyl-d-erythrit...")
 
(Created page with "Category:Gene == Gene Tiso_gene_8801 == * left end position: ** 420 * transcription direction: ** POSITIVE * right end position: ** 2059 * centisome position: ** 4.256613...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.60-RXN 2.7.7.60-RXN] ==
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== Gene Tiso_gene_8801 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 420
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* common name:
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* transcription direction:
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** 2-c-methyl-d-erythritol_4-phosphate_cytidylyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.7.60 EC-2.7.7.60]
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** 2059
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* centisome position:
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** 4.256613   
 
* Synonym(s):
 
* Synonym(s):
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** 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)
 
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-15556]]
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** 1 [[PROTON]][c] '''+''' 1 [[2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H+[c] '''+''' 1 2-C-methyl-D-erythritol 4-phosphate[c] '''+''' 1 CTP[c] '''=>''' 1 diphosphate[c] '''+''' 1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c]
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_17568]]
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* [[PWY-7511]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=420}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13429 13429]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2059}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05633 R05633]
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{{#set: centisome position=4.256613    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: common name=2-c-methyl-d-erythritol_4-phosphate_cytidylyltransferase}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: ec number=EC-2.7.7.60}}
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{{#set: common name=4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)}}
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{{#set: gene associated=Tiso_gene_17568}}
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{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 15:47, 10 January 2018

Gene Tiso_gene_8801

  • left end position:
    • 420
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2059
  • centisome position:
    • 4.256613
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=1.2.1.65-RXN&oldid=10425"