Difference between revisions of "ACRYLATE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-METHYL-3-PHYTYL-14-NAPHTHOQUINONE 2-METHYL-3-PHYTYL-14-NAPHTHOQUINONE] == * smiles: ** CC(C)C...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTMPKI-RXN DTMPKI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidylate_kinase * ec n...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-METHYL-3-PHYTYL-14-NAPHTHOQUINONE 2-METHYL-3-PHYTYL-14-NAPHTHOQUINONE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTMPKI-RXN DTMPKI-RXN] ==
−
* smiles:
+
* direction:
−
** CC(C)CCCC(C)CCCC(C)CCCC(C)=CCC2(=C(C(=O)C1(C=CC=CC=1C2=O))C)
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=MBWXNTAXLNYFJB-LKUDQCMESA-N
+
 
* common name:
 
* common name:
−
** phylloquinone
+
** thymidylate_kinase
−
* molecular weight:
+
* ec number:
−
** 450.703   
+
** [http://enzyme.expasy.org/EC/2.7.4.12 EC-2.7.4.12]
 +
** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13]
 +
** [http://enzyme.expasy.org/EC/2.7.4.9 EC-2.7.4.9]
 
* Synonym(s):
 
* Synonym(s):
−
** 2-methyl-3-phytyl-1,4-naphthoquinone
 
−
** phytonadione
 
−
** phytomenadione
 
−
** 3-phytylmenadione
 
−
** vitamin K1
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[R06859]]
+
** 1 [[TMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[TDP]][c] '''+''' 1 [[ADP]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
−
* [[1.1.4.1-RXN]]
+
** 1 dTMP[c] '''+''' 1 ATP[c] '''=>''' 1 dTDP[c] '''+''' 1 ADP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_3755]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 +
** '''12''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[manual]]:
 +
** [[primary_network]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* NCI:
+
* RHEA:
−
** [http://cactus.nci.nih.gov/ncidb2.2/?nsc=270681 270681]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13517 13517]
−
* CAS : 84-80-0
+
* LIGAND-RXN:
−
* Wikipedia : Phylloquinone
+
** [http://www.genome.jp/dbget-bin/www_bget?R02094 R02094]
−
* PUBCHEM:
+
* UNIPROT:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5280483 5280483]
+
** [http://www.uniprot.org/uniprot/Q57741 Q57741]
−
* HMDB : HMDB03555
+
** [http://www.uniprot.org/uniprot/Q9PPF3 Q9PPF3]
−
* LIGAND-CPD:
+
** [http://www.uniprot.org/uniprot/P0A720 P0A720]
−
** [http://www.genome.jp/dbget-bin/www_bget?C02059 C02059]
+
** [http://www.uniprot.org/uniprot/Q8X8H7 Q8X8H7]
−
* CHEMSPIDER:
+
** [http://www.uniprot.org/uniprot/Q9JVE7 Q9JVE7]
−
** [http://www.chemspider.com/Chemical-Structure.4444124.html 4444124]
+
** [http://www.uniprot.org/uniprot/P33803 P33803]
−
* CHEBI:
+
** [http://www.uniprot.org/uniprot/P42490 P42490]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=583972 583972]
+
** [http://www.uniprot.org/uniprot/P00572 P00572]
−
{{#set: smiles=CC(C)CCCC(C)CCCC(C)CCCC(C)=CCC2(=C(C(=O)C1(C=CC=CC=1C2=O))C)}}
+
** [http://www.uniprot.org/uniprot/Q80HT9 Q80HT9]
−
{{#set: inchi key=InChIKey=MBWXNTAXLNYFJB-LKUDQCMESA-N}}
+
** [http://www.uniprot.org/uniprot/P68693 P68693]
−
{{#set: common name=phylloquinone}}
+
** [http://www.uniprot.org/uniprot/P23919 P23919]
−
{{#set: molecular weight=450.703    }}
+
** [http://www.uniprot.org/uniprot/P36590 P36590]
−
{{#set: common name=2-methyl-3-phytyl-1,4-naphthoquinone|phytonadione|phytomenadione|3-phytylmenadione|vitamin K1}}
+
** [http://www.uniprot.org/uniprot/Q9RA29 Q9RA29]
−
{{#set: produced by=R06859}}
+
** [http://www.uniprot.org/uniprot/O81650 O81650]
−
{{#set: consumed or produced by=1.1.4.1-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=thymidylate_kinase}}
 +
{{#set: ec number=EC-2.7.4.12}}
 +
{{#set: ec number=EC-2.7.4.13}}
 +
{{#set: ec number=EC-2.7.4.9}}
 +
{{#set: gene associated=Tiso_gene_3755}}
 +
{{#set: in pathway=PWY-7210|PWY-7198|PWY-7184|PWY-7187|PWY-7197|PWY0-166|PWY-6545}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 15:48, 10 January 2018

Reaction DTMPKI-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dTMP[c] + 1 ATP[c] => 1 dTDP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV: PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7187, pyrimidine deoxyribonucleotides de novo biosynthesis II: PWY-7187
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7197, pyrimidine deoxyribonucleotide phosphorylation: PWY-7197
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 12 reactions found over 17 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ACRYLATE&oldid=10495"