Difference between revisions of "RXN-11477"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_5669 == * left end position: ** 7803 * transcription direction: ** POSITIVE * right end position: ** 8099 * centisome position: ** 59.65140...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** uropor...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** ORF |
| − | + | ** uroporphyrinogen_synthase | |
| − | ** | + | * ec number: |
| − | * | + | ** [http://enzyme.expasy.org/EC/4.2.1.75 EC-4.2.1.75] |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** | + | ** 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c] |
| − | *** | + | * With common name(s): |
| − | * [[ | + | ** 1 preuroporphyrinogen[c] '''=>''' 1 H2O[c] '''+''' 1 uroporphyrinogen-III[c] |
| − | ** | + | |
| − | *** | + | == Genes associated with this reaction == |
| − | == Pathways | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[ | + | * [[Tiso_gene_18827]] |
| − | * [[PWY- | + | ** IN-SILICO_ANNOTATION |
| + | ***EC-NUMBER | ||
| + | * [[Tiso_gene_11630]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | ** [[pantograph]]-[[esiliculosus]] | ||
| + | ** [[pantograph]]-[[creinhardtii]] | ||
| + | == Pathways == | ||
| + | * [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188] | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * [[orthology]]: | ||
| + | ** [[pantograph]]: | ||
| + | *** [[creinhardtii]] | ||
| + | *** [[esiliculosus]] | ||
| + | * [[manual]]: | ||
| + | ** [[primary_network]] | ||
| + | * [[annotation]]: | ||
| + | ** [[pathwaytools]]: | ||
| + | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165] |
| − | {{#set: | + | * UNIPROT: |
| − | {{#set: pathway | + | ** [http://www.uniprot.org/uniprot/P10746 P10746] |
| + | ** [http://www.uniprot.org/uniprot/P51163 P51163] | ||
| + | ** [http://www.uniprot.org/uniprot/P21248 P21248] | ||
| + | ** [http://www.uniprot.org/uniprot/Q58401 Q58401] | ||
| + | ** [http://www.uniprot.org/uniprot/P09126 P09126] | ||
| + | ** [http://www.uniprot.org/uniprot/Q59294 Q59294] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=ORF}} | ||
| + | {{#set: common name=uroporphyrinogen_synthase}} | ||
| + | {{#set: ec number=EC-4.2.1.75}} | ||
| + | {{#set: gene associated=Tiso_gene_18827|Tiso_gene_11630}} | ||
| + | {{#set: in pathway=PWY-5189|PWY-5188}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
| + | {{#set: reconstruction source=creinhardtii|esiliculosus}} | ||
| + | {{#set: reconstruction category=manual}} | ||
| + | {{#set: reconstruction source=primary_network}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
| + | {{#set: reconstruction source=in-silico_annotation}} | ||
Revision as of 15:49, 10 January 2018
Contents
Reaction UROGENIIISYN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- ORF
- uroporphyrinogen_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 HYDROXYMETHYLBILANE[c] => 1 WATER[c] + 1 UROPORPHYRINOGEN-III[c]
- With common name(s):
- 1 preuroporphyrinogen[c] => 1 H2O[c] + 1 uroporphyrinogen-III[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_18827
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_11630
- IN-SILICO_ANNOTATION
- EC-NUMBER
- pantograph-esiliculosus
- pantograph-creinhardtii
- IN-SILICO_ANNOTATION
Pathways
- PWY-5189, tetrapyrrole biosynthesis II (from glycine): PWY-5189
- 3 reactions found over 4 reactions in the full pathway
- PWY-5188, tetrapyrrole biosynthesis I (from glutamate): PWY-5188
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
External links
