Difference between revisions of "Tiso gene 16992"

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(Created page with "Category:Gene == Gene Tiso_gene_19622 == * left end position: ** 203 * transcription direction: ** POSITIVE * right end position: ** 2037 * centisome position: ** 9.385114...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phospho...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_19622 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] ==
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* left end position:
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* direction:
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** 203
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** thymidine_phosphorylase
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* right end position:
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** ORF
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** 2037
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.4.8 EC-2.7.4.8]
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** 9.385114   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-11839]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[GMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GDP]][c]
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***automated-name-match
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* With common name(s):
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* [[RXN-11840]]
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** 1 GMP[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 GDP[c]
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** in-silico_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
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* [[RXN-11841]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_1011]]
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***automated-name-match
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** IN-SILICO_ANNOTATION
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* [[RXN-11842]]
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***EC-NUMBER
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** in-silico_annotation
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* [[Tiso_gene_4560]]
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***automated-name-match
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** [[pantograph]]-[[athaliana]]
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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* [[Tiso_gene_12554]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***automated-name-match
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***EC-NUMBER
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** experimental_annotation
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** [[pantograph]]-[[athaliana]]
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***automated-name-match
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_15049]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=203}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20780 20780]
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{{#set: right end position=2037}}
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* LIGAND-RXN:
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{{#set: centisome position=9.385114    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00332 R00332]
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{{#set: reaction associated=RXN-11839|RXN-11840|RXN-11841|RXN-11842|TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9PNB8 Q9PNB8]
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** [http://www.uniprot.org/uniprot/Q9CEE3 Q9CEE3]
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** [http://www.uniprot.org/uniprot/Q9JT96 Q9JT96]
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** [http://www.uniprot.org/uniprot/P44310 P44310]
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** [http://www.uniprot.org/uniprot/P15454 P15454]
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** [http://www.uniprot.org/uniprot/P60546 P60546]
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** [http://www.uniprot.org/uniprot/P31006 P31006]
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** [http://www.uniprot.org/uniprot/P46195 P46195]
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** [http://www.uniprot.org/uniprot/Q16774 Q16774]
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** [http://www.uniprot.org/uniprot/P72648 P72648]
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** [http://www.uniprot.org/uniprot/Q6RHR9 Q6RHR9]
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** [http://www.uniprot.org/uniprot/Q9M681 Q9M681]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=thymidine_phosphorylase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-2.7.4.8}}
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{{#set: gene associated=Tiso_gene_1011|Tiso_gene_4560|Tiso_gene_12554|Tiso_gene_15049}}
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{{#set: in pathway=PWY-7221}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:49, 10 January 2018

Reaction GUANYL-KIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thymidine_phosphorylase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GMP[c] + 1 ATP[c] => 1 ADP[c] + 1 GDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links








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