Difference between revisions of "PWY-5174"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-COUMARATE--COA-LIGASE-RXN 4-COUMARATE--COA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec numb...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHAD_3mob_h DHAD_3mob_h] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroxy-acid dehydrat...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-COUMARATE--COA-LIGASE-RXN 4-COUMARATE--COA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHAD_3mob_h DHAD_3mob_h] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/6.2.1.12 EC-6.2.1.12]
+
** dihydroxy-acid dehydratase, 3-Methyl-2-oxobutanoate, chloroplast
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[COUMARATE]][c] '''=>''' 1 [[P-COUMAROYL-COA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
+
** 1.0 [[CPD-13357]][h] '''=>''' 1.0 [[2-KETO-ISOVALERATE]][h] '''+''' 1.0 [[WATER]][h]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 4-coumarate[c] '''=>''' 1 4-coumaroyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
+
** 1.0 (2R)-2,3-dihydroxy-3-methylbutanoate[h] '''=>''' 1.0 3-methyl-2-oxobutanoate[h] '''+''' 1.0 H2O[h]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12275]]
+
* [[Tiso_gene_1563]]
−
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[creinhardtii]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14183]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6435]], 4-hydroxybenzoate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6435 PWY-6435]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
 
−
** '''3''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7046]], 4-coumarate degradation (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7046 PWY-7046]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
 
−
** '''7''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-7397]], naringenin biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7397 PWY-7397]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6320]], phaselate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6320 PWY-6320]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5754]], 4-hydroxybenzoate biosynthesis I (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5754 PWY-5754]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5135]], xanthohumol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5135 PWY-5135]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6982]], umbelliferone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6982 PWY-6982]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[athaliana]]
+
*** [[creinhardtii]]
−
*** [[esiliculosus]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19641 19641]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01616 R01616]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P31684 P31684]
 
−
** [http://www.uniprot.org/uniprot/P31685 P31685]
 
−
** [http://www.uniprot.org/uniprot/Q9SWH8 Q9SWH8]
 
−
** [http://www.uniprot.org/uniprot/Q9SWH7 Q9SWH7]
 
−
** [http://www.uniprot.org/uniprot/P17814 P17814]
 
−
** [http://www.uniprot.org/uniprot/P31687 P31687]
 
−
** [http://www.uniprot.org/uniprot/Q8S5C2 Q8S5C2]
 
−
** [http://www.uniprot.org/uniprot/P14912 P14912]
 
−
** [http://www.uniprot.org/uniprot/P14913 P14913]
 
−
** [http://www.uniprot.org/uniprot/P31686 P31686]
 
−
** [http://www.uniprot.org/uniprot/Q42524 Q42524]
 
−
** [http://www.uniprot.org/uniprot/Q42943 Q42943]
 
−
** [http://www.uniprot.org/uniprot/Q42982 Q42982]
 
−
** [http://www.uniprot.org/uniprot/P93360 P93360]
 
−
** [http://www.uniprot.org/uniprot/P93361 P93361]
 
−
** [http://www.uniprot.org/uniprot/O24146 O24146]
 
−
** [http://www.uniprot.org/uniprot/O48868 O48868]
 
−
** [http://www.uniprot.org/uniprot/O48869 O48869]
 
−
** [http://www.uniprot.org/uniprot/O81139 O81139]
 
−
** [http://www.uniprot.org/uniprot/O81140 O81140]
 
−
** [http://www.uniprot.org/uniprot/P41636 P41636]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.2.1.12}}
+
{{#set: common name=dihydroxy-acid dehydratase, 3-Methyl-2-oxobutanoate, chloroplast}}
−
{{#set: gene associated=Tiso_gene_12275|Tiso_gene_14183}}
+
{{#set: gene associated=Tiso_gene_1563}}
−
{{#set: in pathway=PWY-6920|PWY-6435|PWY-7398|PWY-7046|PWY-361|PWY-7397|PWY-6320|PWY1F-FLAVSYN|PWY-5754|PWY-5135|PWY-6982}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
{{#set: reconstruction source=creinhardtii}}

Revision as of 15:51, 10 January 2018

Reaction DHAD_3mob_h

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dihydroxy-acid dehydratase, 3-Methyl-2-oxobutanoate, chloroplast
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 (2R)-2,3-dihydroxy-3-methylbutanoate[h] => 1.0 3-methyl-2-oxobutanoate[h] + 1.0 H2O[h]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5174&oldid=10633"