Difference between revisions of "RXN-11065"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] == * direction: ** REVERSIBLE * common name: ** rab_proteins_geranylgeranyltrans...")
 
(Created page with "Category:Gene == Gene Tiso_gene_10879 == * left end position: ** 3583 * transcription direction: ** POSITIVE * right end position: ** 5854 * centisome position: ** 43.5411...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] ==
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== Gene Tiso_gene_10879 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 3583
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* common name:
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* transcription direction:
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** rab_proteins_geranylgeranyltransferase_component_a_2
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** POSITIVE
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** protein_geranylgeranyltransferase_type_ii
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* right end position:
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* ec number:
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** 5854
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** [http://enzyme.expasy.org/EC/2.5.1.60 EC-2.5.1.60]
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.5.1.59 EC-2.5.1.59]
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** 43.541138   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RIBULP3EPIM-RXN]]
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** 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[PROT-CYS]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[S-GERANYLGERANYL-PROTEIN]][c]
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** experimental_annotation
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* With common name(s):
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***ec-number
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** 1 geranylgeranyl diphosphate[c] '''+''' 1 a [protein]-L-cysteine[c] '''<=>''' 1 diphosphate[c] '''+''' 1 a [protein]-S-geranylgeranyl-L-cysteine[c]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18627]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18628]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18785]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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** [[pantograph]]-[[creinhardtii]]
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== Reconstruction information  ==
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== Pathways associated ==
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* [[orthology]]:
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* [[P124-PWY]]
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** [[pantograph]]:
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* [[CALVIN-PWY]]
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*** [[esiliculosus]]
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* [[P21-PWY]]
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* [[annotation]]:
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* [[PWY-5723]]
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** [[pathwaytools]]:
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* [[PWY-1861]]
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*** [[in-silico_annotation]]
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* [[P122-PWY]]
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* [[P185-PWY]]
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* [[NONOXIPENT-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=3583}}
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{{#set: common name=rab_proteins_geranylgeranyltransferase_component_a_2}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=protein_geranylgeranyltransferase_type_ii}}
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{{#set: right end position=5854}}
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{{#set: ec number=EC-2.5.1.60}}
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{{#set: centisome position=43.541138    }}
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{{#set: ec number=EC-2.5.1.59}}
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{{#set: reaction associated=RIBULP3EPIM-RXN}}
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{{#set: gene associated=Tiso_gene_18627|Tiso_gene_18628|Tiso_gene_18785}}
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{{#set: pathway associated=P124-PWY|CALVIN-PWY|P21-PWY|PWY-5723|PWY-1861|P122-PWY|P185-PWY|NONOXIPENT-PWY}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 15:51, 10 January 2018

Gene Tiso_gene_10879

  • left end position:
    • 3583
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5854
  • centisome position:
    • 43.541138
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11065&oldid=10663"