Difference between revisions of "Tiso gene 8780"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12490 RXN-12490] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12490 RXN-12490] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** L-alanine biosynthesis III
+
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
 +
** 3-hydroxyacyl-_dehydrogenase
 +
** hydroxyacyl-coenzyme_a_mitochondrial
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''1''' reaction(s) found
+
* With identifiers:
−
** [[RXN0-308]]
+
** 1 [[NAD]][c] '''+''' 1 [[CPD0-2244]][c] '''=>''' 1 [[CPD0-2123]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
−
== Reaction(s) not found ==
+
* With common name(s):
−
* '''0''' reaction(s) not found
+
** 1 NAD+[c] '''+''' 1 (S)-3-hydroxydecanoyl-CoA[c] '''=>''' 1 3-oxodecanoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_5857]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_14262]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_18839]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14027]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_14026]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_18838]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[athaliana]]
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
* RHEA:
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31188 31188]
−
{{#set: taxonomic range=TAX-2759}}
+
* LIGAND-RXN:
−
{{#set: taxonomic range=TAX-2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04743 R04743]
−
{{#set: common name=L-alanine biosynthesis III}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reaction found=1}}
+
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
−
{{#set: reaction not found=0}}
+
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
 +
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
 +
{{#set: ec number=EC-1.1.1.35}}
 +
{{#set: gene associated=Tiso_gene_5857|Tiso_gene_14262|Tiso_gene_18839|Tiso_gene_14027|Tiso_gene_14026|Tiso_gene_18838}}
 +
{{#set: in pathway=PWY-7094}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 15:52, 10 January 2018

Reaction RXN-12490

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 (S)-3-hydroxydecanoyl-CoA[c] => 1 3-oxodecanoyl-CoA[c] + 1 H+[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7094, fatty acid salvage: PWY-7094
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8780&oldid=10694"