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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FGAMSYN-RXN FGAMSYN-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=16S-rRNA-cytidine1402 16S-rRNA-cytidine1402] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** phosphoribosylformylglycinamidine_synthase-like | + | ** a cytidine1402 in 16S rRNA |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/6.3.5.3 EC-6.3.5.3]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | * [[RXN-11637]] |
| − | ** 1 [[ATP]][c] '''+''' 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
| + | * [[RXN-11638]] |
| − | * With common name(s):
| + | == Reaction(s) known to produce the compound == |
| − | ** 1 ATP[c] '''+''' 1 N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide[c] '''+''' 1 L-glutamine[c] '''+''' 1 H2O[c] '''=>''' 1 ADP[c] '''+''' 1 L-glutamate[c] '''+''' 1 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
| + | == Reaction(s) of unknown directionality == |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_5865]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
| + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | * [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
| + | |
| − | ** '''4''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | * [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
| + | |
| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[athaliana]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=a cytidine1402 in 16S rRNA}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17129 17129]
| + | {{#set: consumed by=RXN-11637|RXN-11638}} |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R04463 R04463]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/O67691 O67691]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9UXW5 Q9UXW5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PNY0 Q9PNY0]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O28339 O28339]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PHZ7 Q9PHZ7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O26270 O26270]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q59042 Q59042]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q58660 Q58660]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O27427 O27427]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JWC5 Q9JWC5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P35852 P35852]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P38972 P38972]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q55843 Q55843]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q55037 Q55037]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P12041 P12041]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P12042 P12042]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P15254 P15254]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O14228 O14228]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P35421 P35421]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZB07 Q9ZB07]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZB06 Q9ZB06]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=phosphoribosylformylglycinamidine_synthase-like}} | + | |
| − | {{#set: ec number=EC-6.3.5.3}} | + | |
| − | {{#set: gene associated=Tiso_gene_5865}}
| + | |
| − | {{#set: in pathway=PWY-6121|PWY-6122|PWY-6277}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=athaliana}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
