Difference between revisions of "PWY-5723"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12490 RXN-12490] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12490 RXN-12490] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* common name:
 
* common name:
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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** purine nucleobases degradation I (anaerobic)
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** 3-hydroxyacyl-_dehydrogenase
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** hydroxyacyl-coenzyme_a_mitochondrial
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
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* Synonym(s):
 
* Synonym(s):
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** purine fermentation
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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* '''4''' reaction(s) found
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** 1 [[CPD0-2244]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD0-2123]][c]
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** [[RXN-7682]]
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* With common name(s):
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** [[RXN0-901]]
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** 1 (S)-3-hydroxydecanoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 3-oxodecanoyl-CoA[c]
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** [[METHENYLTHFCYCLOHYDRO-RXN]]
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** [[GUANINE-DEAMINASE-RXN]]
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== Genes associated with this reaction ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* '''13''' reaction(s) not found
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* [[Tiso_gene_14262]]
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** [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=R127-RXN R127-RXN]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8755 RXN-8755]
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** EXPERIMENTAL_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8752 RXN-8752]
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* [[Tiso_gene_5857]]
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** [http://metacyc.org/META/NEW-IMAGE?object=R128-RXN R128-RXN]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=R13-RXN R13-RXN]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-7566 RXN-7566]
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** EXPERIMENTAL_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=R62-RXN R62-RXN]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-FORMIMINOTRANSFERASE-RXN GLYCINE-FORMIMINOTRANSFERASE-RXN]
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** [[pantograph]]-[[athaliana]]
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** [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.4-RXN 4.3.1.4-RXN]
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** [[pantograph]]-[[esiliculosus]]
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** [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.2-RXN 1.2.1.2-RXN]
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** [[pantograph]]-[[creinhardtii]]
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** [http://metacyc.org/META/NEW-IMAGE?object=R63-RXN R63-RXN]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_18839]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14027]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14026]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18838]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-1239}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31188 31188]
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{{#set: common name=purine nucleobases degradation I (anaerobic)}}
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* LIGAND-RXN:
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{{#set: common name=purine fermentation}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04743 R04743]
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{{#set: reaction found=4}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction not found=13}}
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: gene associated=Tiso_gene_14262|Tiso_gene_5857|Tiso_gene_18839|Tiso_gene_14027|Tiso_gene_14026|Tiso_gene_18838}}
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{{#set: in pathway=PWY-7094}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 15:52, 10 January 2018

Pathway P164-PWY

  • taxonomic range:
  • common name:
    • purine nucleobases degradation I (anaerobic)
  • Synonym(s):
    • purine fermentation

Reaction(s) found

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5723&oldid=10732"