Difference between revisions of "P108-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-RXN CERAMIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASNSYNB-RXN ASNSYNB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparagine_synthetase *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-RXN CERAMIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASNSYNB-RXN ASNSYNB-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** asparagine_synthetase
 +
** asparagine_synthetase_domaincontaining_protein_putat
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
+
** [http://enzyme.expasy.org/EC/6.3.5.4 EC-6.3.5.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[N-Acylsphingosine]][c] '''=>''' 1 [[Fatty-Acids]][c] '''+''' 1 [[SPHINGOSINE]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ASN]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a sphingosine ceramide[c] '''=>''' 1 a fatty acid[c] '''+''' 1 sphingosine[c]
+
** 1 H2O[c] '''+''' 1 L-aspartate[c] '''+''' 1 ATP[c] '''+''' 1 L-glutamine[c] '''=>''' 1 L-glutamate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 L-asparagine[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14341]]
+
* [[Tiso_gene_2973]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_7495]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11470 PWY3DJ-11470]
+
* [[ASPARAGINE-BIOSYNTHESIS]], L-asparagine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-BIOSYNTHESIS ASPARAGINE-BIOSYNTHESIS]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[athaliana]]
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
 +
* [[manual]]:
 +
** [[primary_network]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20856 20856]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01493 R01493]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00578 R00578]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P22106 P22106]
 +
** [http://www.uniprot.org/uniprot/P08243 P08243]
 +
** [http://www.uniprot.org/uniprot/P19891 P19891]
 +
** [http://www.uniprot.org/uniprot/P17714 P17714]
 +
** [http://www.uniprot.org/uniprot/P19251 P19251]
 +
** [http://www.uniprot.org/uniprot/P19252 P19252]
 +
** [http://www.uniprot.org/uniprot/Q58516 Q58516]
 +
** [http://www.uniprot.org/uniprot/Q9CDJ2 Q9CDJ2]
 +
** [http://www.uniprot.org/uniprot/Q9UZJ0 Q9UZJ0]
 +
** [http://www.uniprot.org/uniprot/O58829 O58829]
 +
** [http://www.uniprot.org/uniprot/Q9UZL3 Q9UZL3]
 +
** [http://www.uniprot.org/uniprot/O26514 O26514]
 +
** [http://www.uniprot.org/uniprot/Q42792 Q42792]
 +
** [http://www.uniprot.org/uniprot/P31752 P31752]
 +
** [http://www.uniprot.org/uniprot/P49091 P49091]
 +
** [http://www.uniprot.org/uniprot/P49089 P49089]
 +
** [http://www.uniprot.org/uniprot/P49088 P49088]
 +
** [http://www.uniprot.org/uniprot/P49090 P49090]
 +
** [http://www.uniprot.org/uniprot/P49092 P49092]
 +
** [http://www.uniprot.org/uniprot/P49093 P49093]
 +
** [http://www.uniprot.org/uniprot/P49094 P49094]
 +
** [http://www.uniprot.org/uniprot/Q43011 Q43011]
 +
** [http://www.uniprot.org/uniprot/P93167 P93167]
 +
** [http://www.uniprot.org/uniprot/O49076 O49076]
 +
** [http://www.uniprot.org/uniprot/P49078 P49078]
 +
** [http://www.uniprot.org/uniprot/Q21463 Q21463]
 +
** [http://www.uniprot.org/uniprot/O77330 O77330]
 +
** [http://www.uniprot.org/uniprot/P78753 P78753]
 +
** [http://www.uniprot.org/uniprot/Q9LFU1 Q9LFU1]
 +
** [http://www.uniprot.org/uniprot/Q9ZST7 Q9ZST7]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.5.1.23}}
+
{{#set: common name=asparagine_synthetase}}
−
{{#set: gene associated=Tiso_gene_14341}}
+
{{#set: common name=asparagine_synthetase_domaincontaining_protein_putat}}
−
{{#set: in pathway=PWY3DJ-11470}}
+
{{#set: ec number=EC-6.3.5.4}}
 +
{{#set: gene associated=Tiso_gene_2973|Tiso_gene_7495}}
 +
{{#set: in pathway=ASPARAGINE-BIOSYNTHESIS}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=athaliana|esiliculosus}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:52, 10 January 2018

Reaction ASNSYNB-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • asparagine_synthetase
    • asparagine_synthetase_domaincontaining_protein_putat
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-aspartate[c] + 1 ATP[c] + 1 L-glutamine[c] => 1 L-glutamate[c] + 1 AMP[c] + 1 H+[c] + 1 L-asparagine[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links








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