Difference between revisions of "PWY-4061"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6491 PWY-6491] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12968 RXN-12968] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6491 PWY-6491] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12968 RXN-12968] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** D-galacturonate degradation III
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** chloroplast_beta-keto_acyl_reductase
 +
* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
* '''1''' reaction(s) found
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* With identifiers:
** [[RXN-11382]]
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-14404]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[CPD-14405]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
== Reaction(s) not found ==
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* With common name(s):
* '''5''' reaction(s) not found
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** 1 H+[c] '''+''' 1 3-oxo-dihomo γ-linolenoyl-CoA[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 3R-hydroxy-dihomo γ-linolenoyl-CoA[c] '''+''' 1 NAD(P)+[c]
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14753 RXN-14753]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-11151 RXN-11151]
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== Genes associated with this reaction  ==
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-11383 RXN-11383]
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Genes have been associated with this reaction based on different elements listed below.
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-11381 RXN-11381]
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* [[Tiso_gene_9871]]
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-11380 RXN-11380]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
 +
* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353]
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** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7592]], arachidonate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7592 PWY-7592]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-4751}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=D-galacturonate degradation III}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
{{#set: reaction found=1}}
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{{#set: ec number=EC-1.1.1.330}}
{{#set: reaction not found=5}}
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{{#set: gene associated=Tiso_gene_9871}}
 +
{{#set: in pathway=PWY-5353|PWY-7592}}
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{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:55, 10 January 2018

Reaction RXN-12968

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 3-oxo-dihomo γ-linolenoyl-CoA[c] + 1 NAD(P)H[c] => 1 3R-hydroxy-dihomo γ-linolenoyl-CoA[c] + 1 NAD(P)+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_9871
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

  • PWY-5353, arachidonate biosynthesis I (6-desaturase, lower eukaryotes): PWY-5353
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-7592, arachidonate biosynthesis III (6-desaturase, mammals): PWY-7592
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links