Difference between revisions of "Seminolipids"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidopyrimidine-d...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** D-galactose degradation III
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** formamidopyrimidine-dna_glycosylase
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** endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b
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** n-glycosylase_dna_lyase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.2.23 EC-3.2.2.23]
 
* Synonym(s):
 
* Synonym(s):
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** UDP-D-galatose biosynthesis (from D-galactose)
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''3''' reaction(s) found
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* With identifiers:
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** [[UTPHEXPURIDYLYLTRANS-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[DNA-containing-diamino-hydro-formamidops]][c] '''=>''' 1 [[DNA-containing-aPurinic-Sites]][c] '''+''' 1 [[CPD-16491]][c]
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** [[UDPGLUCEPIM-RXN]]
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* With common name(s):
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** [[GALACTOKIN-RXN]]
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** 1 H2O[c] '''+''' 1 a ring-opened 7-methylguanine in DNA[c] '''=>''' 1 an apurinic site within DNA[c] '''+''' 1 2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimidine[c]
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== Reaction(s) not found ==
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* '''0''' reaction(s) not found
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9068]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14609]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_1280]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6558]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16992]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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* UNIPROT:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3821 PWY-3821]
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** [http://www.uniprot.org/uniprot/P44948 P44948]
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{{#set: taxonomic range=TAX-3193}}
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** [http://www.uniprot.org/uniprot/P57014 P57014]
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{{#set: common name=D-galactose degradation III}}
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** [http://www.uniprot.org/uniprot/P05523 P05523]
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{{#set: common name=UDP-D-galatose biosynthesis (from D-galactose)}}
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** [http://www.uniprot.org/uniprot/P19210 P19210]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/P74290 P74290]
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{{#set: reaction not found=0}}
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** [http://www.uniprot.org/uniprot/O69470 O69470]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=formamidopyrimidine-dna_glycosylase}}
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{{#set: common name=endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b}}
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{{#set: common name=n-glycosylase_dna_lyase}}
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{{#set: ec number=EC-3.2.2.23}}
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{{#set: gene associated=Tiso_gene_9068|Tiso_gene_14609|Tiso_gene_1280|Tiso_gene_6558|Tiso_gene_16992}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:55, 10 January 2018

Reaction 3.2.2.23-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • formamidopyrimidine-dna_glycosylase
    • endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b
    • n-glycosylase_dna_lyase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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