Difference between revisions of "Seminolipids"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidopyrimidine-d...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** D-galactose degradation III
+
** formamidopyrimidine-dna_glycosylase
 +
** endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b
 +
** n-glycosylase_dna_lyase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.2.2.23 EC-3.2.2.23]
 
* Synonym(s):
 
* Synonym(s):
−
** UDP-D-galatose biosynthesis (from D-galactose)
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''3''' reaction(s) found
+
* With identifiers:
−
** [[UTPHEXPURIDYLYLTRANS-RXN]]
+
** 1 [[WATER]][c] '''+''' 1 [[DNA-containing-diamino-hydro-formamidops]][c] '''=>''' 1 [[DNA-containing-aPurinic-Sites]][c] '''+''' 1 [[CPD-16491]][c]
−
** [[UDPGLUCEPIM-RXN]]
+
* With common name(s):
−
** [[GALACTOKIN-RXN]]
+
** 1 H2O[c] '''+''' 1 a ring-opened 7-methylguanine in DNA[c] '''=>''' 1 an apurinic site within DNA[c] '''+''' 1 2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimidine[c]
−
== Reaction(s) not found ==
+
 
−
* '''0''' reaction(s) not found
+
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_9068]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14609]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_1280]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_6558]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_16992]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* ARACYC:
+
* UNIPROT:
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3821 PWY-3821]
+
** [http://www.uniprot.org/uniprot/P44948 P44948]
−
{{#set: taxonomic range=TAX-3193}}
+
** [http://www.uniprot.org/uniprot/P57014 P57014]
−
{{#set: common name=D-galactose degradation III}}
+
** [http://www.uniprot.org/uniprot/P05523 P05523]
−
{{#set: common name=UDP-D-galatose biosynthesis (from D-galactose)}}
+
** [http://www.uniprot.org/uniprot/P19210 P19210]
−
{{#set: reaction found=3}}
+
** [http://www.uniprot.org/uniprot/P74290 P74290]
−
{{#set: reaction not found=0}}
+
** [http://www.uniprot.org/uniprot/O69470 O69470]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=formamidopyrimidine-dna_glycosylase}}
 +
{{#set: common name=endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b}}
 +
{{#set: common name=n-glycosylase_dna_lyase}}
 +
{{#set: ec number=EC-3.2.2.23}}
 +
{{#set: gene associated=Tiso_gene_9068|Tiso_gene_14609|Tiso_gene_1280|Tiso_gene_6558|Tiso_gene_16992}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 15:55, 10 January 2018

Reaction 3.2.2.23-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • formamidopyrimidine-dna_glycosylase
    • endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b
    • n-glycosylase_dna_lyase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Seminolipids&oldid=10920"