Difference between revisions of "O-SUCCINYL-L-HOMOSERINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidopyrimidine-d...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOPHOSPHORYL-RXN GLYCOPHOSPHORYL-RXN] == * direction: ** REVERSIBLE * common name: ** thymidine_...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOPHOSPHORYL-RXN GLYCOPHOSPHORYL-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** formamidopyrimidine-dna_glycosylase
+
** thymidine_phosphorylase
−
** endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b
+
−
** n-glycosylase_dna_lyase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.2.23 EC-3.2.2.23]
+
** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[DNA-containing-diamino-hydro-formamidops]][c] '''=>''' 1 [[CPD-16491]][c] '''+''' 1 [[DNA-containing-aPurinic-Sites]][c]
+
** 1 [[Pi]][c] '''+''' 1 [[Glycogens]][c] '''<=>''' 1 [[CPD0-971]][c] '''+''' 1 [[GLC-1-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a ring-opened 7-methylguanine in DNA[c] '''=>''' 1 2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimidine[c] '''+''' 1 an apurinic site within DNA[c]
+
** 1 phosphate[c] '''+''' 1 a glycogen[c] '''<=>''' 1 an &alpha;-limit dextrin[c] '''+''' 1 &alpha;-D-glucopyranose 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9068]]
+
* [[Tiso_gene_1011]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14609]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_1280]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_6558]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_16992]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5941]], glycogen degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5941 PWY-5941]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[annotation]]:
 
* [[annotation]]:
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*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P44948 P44948]
+
{{#set: common name=thymidine_phosphorylase}}
−
** [http://www.uniprot.org/uniprot/P57014 P57014]
+
{{#set: ec number=EC-2.4.1.1}}
−
** [http://www.uniprot.org/uniprot/P05523 P05523]
+
{{#set: gene associated=Tiso_gene_1011}}
−
** [http://www.uniprot.org/uniprot/P19210 P19210]
+
{{#set: in pathway=PWY-5941|GLYCOCAT-PWY}}
−
** [http://www.uniprot.org/uniprot/P74290 P74290]
+
−
** [http://www.uniprot.org/uniprot/O69470 O69470]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=formamidopyrimidine-dna_glycosylase}}
+
−
{{#set: common name=endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b}}
+
−
{{#set: common name=n-glycosylase_dna_lyase}}
+
−
{{#set: ec number=EC-3.2.2.23}}
+
−
{{#set: gene associated=Tiso_gene_9068|Tiso_gene_14609|Tiso_gene_1280|Tiso_gene_6558|Tiso_gene_16992}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:56, 10 January 2018

Reaction GLYCOPHOSPHORYL-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • thymidine_phosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 phosphate[c] + 1 a glycogen[c] <=> 1 an α-limit dextrin[c] + 1 α-D-glucopyranose 1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5941, glycogen degradation II: PWY-5941
    • 3 reactions found over 6 reactions in the full pathway
  • GLYCOCAT-PWY, glycogen degradation I: GLYCOCAT-PWY
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=O-SUCCINYL-L-HOMOSERINE&oldid=10968"