Difference between revisions of "PWY-5138"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_6180 == * left end position: ** 56 * transcription direction: ** POSITIVE * right end position: ** 11601 * centisome position: ** 0.4491498...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10780 RXN-10780] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_6180 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10780 RXN-10780] ==
* left end position:
+
* direction:
** 56
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** POSITIVE
+
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
* right end position:
+
** 11601
+
* centisome position:
+
** 0.44914982   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* [[ATPASE-RXN]]
+
* With identifiers:
** in-silico_annotation
+
** 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[5-HYDROXYINDOLE_ACETATE]][c]
***ec-number
+
* With common name(s):
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** 1 5-hydroxyindole acetaldehyde[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''=>''' 2 H+[c] '''+''' 1 NADH[c] '''+''' 1 5-hydroxyindole acetate[c]
** in-silico_annotation
+
 
***ec-number
+
== Genes associated with this reaction  ==
* [[RXN-12195]]
+
Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
+
* [[Tiso_gene_7322]]
***ec-number
+
** [[pantograph]]-[[athaliana]]
* [[RXN-12196]]
+
** [[pantograph]]-[[esiliculosus]]
** in-silico_annotation
+
* [[Tiso_gene_3513]]
***ec-number
+
** [[pantograph]]-[[athaliana]]
* [[RXN0-5462]]
+
== Pathways  ==
** in-silico_annotation
+
* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
***ec-number
+
** '''6''' reactions found over '''7''' reactions in the full pathway
== Pathways associated ==
+
== Reconstruction information  ==
* [[PWY-7210]]
+
* [[orthology]]:
* [[PWY-7198]]
+
** [[pantograph]]:
* [[PWY-6545]]
+
*** [[esiliculosus]]
* [[PWY-7184]]
+
*** [[athaliana]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=56}}
+
* RHEA:
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31215 31215]
{{#set: right end position=11601}}
+
* LIGAND-RXN:
{{#set: centisome position=0.44914982    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04903 R04903]
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-6545|PWY-7184}}
+
{{#set: ec number=EC-1.2.1.3}}
 +
{{#set: gene associated=Tiso_gene_7322|Tiso_gene_3513}}
 +
{{#set: in pathway=PWY-6313}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus|athaliana}}

Revision as of 16:02, 10 January 2018

Reaction RXN-10780

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6313, serotonin degradation: PWY-6313
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links