Difference between revisions of "Tiso gene 14848"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=EPMEACPR EPMEACPR] == * direction: ** LEFT-TO-RIGHT * common name: ** Enoylpimeloyl-[ACP] methyl es...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-RXN ALCOHOL-DEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** polyketi...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=EPMEACPR EPMEACPR] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-RXN ALCOHOL-DEHYDROG-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Enoylpimeloyl-[ACP] methyl ester reductase
+
** polyketide_synthase
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[PROTON]][m] '''+''' 1.0 [[Enoylpimeloyl-ACP-methyl-esters]][m] '''+''' 1.0 [[NADPH]][m] '''=>''' 1.0 [[NADP]][m] '''+''' 1.0 [[Pimeloyl-ACP-methyl-esters]][m]
+
** 1 [[NAD]][c] '''+''' 1 [[ETOH]][c] '''<=>''' 1 [[ACETALD]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[m] '''+''' 1.0 an enoylpimeloyl-[acp] methyl ester[m] '''+''' 1.0 NADPH[m] '''=>''' 1.0 NADP+[m] '''+''' 1.0 a pimeloyl-[acp] methyl ester[m]
+
** 1 NAD+[c] '''+''' 1 ethanol[c] '''<=>''' 1 acetaldehyde[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10778]]
+
* [[Tiso_gene_5424]]
−
** [[pantograph]]-[[creinhardtii]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6563]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_18459]]
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_7649]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6562]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5425]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY66-21]], ethanol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-21 PWY66-21]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[ETOH-ACETYLCOA-ANA-PWY]], ethanol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ETOH-ACETYLCOA-ANA-PWY ETOH-ACETYLCOA-ANA-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
 +
** '''9''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-6333]], acetaldehyde biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6333 PWY-6333]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5486]], pyruvate fermentation to ethanol II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5486 PWY-5486]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[P161-PWY]], acetylene degradation: [http://metacyc.org/META/NEW-IMAGE?object=P161-PWY P161-PWY]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5480]], pyruvate fermentation to ethanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5480 PWY-5480]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6587]], pyruvate fermentation to ethanol III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6587 PWY-6587]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[creinhardtii]]
+
*** [[synechocystis]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=Enoylpimeloyl-[ACP] methyl ester reductase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25290 25290]
−
{{#set: gene associated=Tiso_gene_10778}}
+
* LIGAND-RXN:
−
{{#set: in pathway=}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00754 R00754]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=polyketide_synthase}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-1.1.1.1}}
 +
{{#set: gene associated=Tiso_gene_5424|Tiso_gene_6563|Tiso_gene_18459|Tiso_gene_7649|Tiso_gene_6562|Tiso_gene_5425}}
 +
{{#set: in pathway=PWY66-21|ETOH-ACETYLCOA-ANA-PWY|PWY-7118|FERMENTATION-PWY|PWY-6333|PWY-5486|P161-PWY|P122-PWY|PWY4LZ-257|PWY-5480|PWY-6587}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: reconstruction source=synechocystis}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:03, 10 January 2018

Reaction ALCOHOL-DEHYDROG-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 ethanol[c] <=> 1 acetaldehyde[c] + 1 H+[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-21, ethanol degradation II: PWY66-21
    • 3 reactions found over 3 reactions in the full pathway
  • ETOH-ACETYLCOA-ANA-PWY, ethanol degradation I: ETOH-ACETYLCOA-ANA-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7118, chitin degradation to ethanol: PWY-7118
    • 4 reactions found over 6 reactions in the full pathway
  • FERMENTATION-PWY, mixed acid fermentation: FERMENTATION-PWY
    • 9 reactions found over 16 reactions in the full pathway
  • PWY-6333, acetaldehyde biosynthesis I: PWY-6333
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5486, pyruvate fermentation to ethanol II: PWY-5486
    • 1 reactions found over 2 reactions in the full pathway
  • P161-PWY, acetylene degradation: P161-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway
  • PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii): PWY4LZ-257
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5480, pyruvate fermentation to ethanol I: PWY-5480
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6587, pyruvate fermentation to ethanol III: PWY-6587
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14848&oldid=11357"