Difference between revisions of "Tiso gene 13314"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10780 RXN-10780] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2973 == * left end position: ** 696 * transcription direction: ** NEGATIVE * right end position: ** 5764 * centisome position: ** 3.909234...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10780 RXN-10780] ==
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== Gene Tiso_gene_2973 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 696
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
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** NEGATIVE
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* right end position:
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** 5764
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* centisome position:
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** 3.909234   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ASNSYNA-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[5-HYDROXYINDOLE_ACETATE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 NAD+[c] '''+''' 1 5-hydroxyindole acetaldehyde[c] '''=>''' 1 NADH[c] '''+''' 2 H+[c] '''+''' 1 5-hydroxyindole acetate[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ASNSYNB-RXN]]
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* [[Tiso_gene_3513]]
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** in-silico_annotation
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** [[pantograph]]-[[athaliana]]
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***ec-number
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* [[Tiso_gene_7322]]
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** experimental_annotation
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***ec-number
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[GLUTAMIN-RXN]]
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* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
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** in-silico_annotation
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** '''6''' reactions found over '''7''' reactions in the full pathway
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***ec-number
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== Reconstruction information  ==
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** experimental_annotation
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* [[orthology]]:
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***ec-number
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** [[pantograph]]:
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** [[pantograph]]-[[esiliculosus]]
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*** [[esiliculosus]]
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== Pathways associated ==
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*** [[athaliana]]
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* [[ASPARAGINE-BIOSYNTHESIS]]
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* [[ASPARAGINESYN-PWY]]
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* [[GLUTAMINDEG-PWY]]
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* [[CITRULBIO-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=696}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31215 31215]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5764}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04903 R04903]
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{{#set: centisome position=3.909234    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ASNSYNA-RXN|ASNSYNB-RXN|GLUTAMIN-RXN}}
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{{#set: ec number=EC-1.2.1.3}}
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{{#set: pathway associated=ASPARAGINE-BIOSYNTHESIS|ASPARAGINESYN-PWY|GLUTAMINDEG-PWY|CITRULBIO-PWY}}
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{{#set: gene associated=Tiso_gene_3513|Tiso_gene_7322}}
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{{#set: in pathway=PWY-6313}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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Revision as of 17:03, 10 January 2018

Gene Tiso_gene_2973

  • left end position:
    • 696
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5764
  • centisome position:
    • 3.909234
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13314&oldid=11400"