Difference between revisions of "TRNA-uridine34"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7416 PWY-7416] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13202 RXN-13202] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl_phosphate_synthet...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7416 PWY-7416] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13202 RXN-13202] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** phospholipid remodeling (phosphatidylcholine, yeast)
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** carbamoyl_phosphate_synthetase
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** protein_pyr1-3
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.4.16 EC-6.3.4.16]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''3''' reaction(s) found
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* With identifiers:
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** [[RXN-15066]]
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** 2 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[AMMONIUM]][c] '''=>''' 2 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[PROTON]][c]
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** [[RXN-15065]]
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* With common name(s):
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** [[RXN-1641]]
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** 2 ATP[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 ammonium[c] '''=>''' 2 ADP[c] '''+''' 1 carbamoyl phosphate[c] '''+''' 1 phosphate[c] '''+''' 2 H+[c]
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== Reaction(s) not found ==
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* '''0''' reaction(s) not found
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_4976]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4975]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4685]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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* RHEA:
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{{#set: common name=phospholipid remodeling (phosphatidylcholine, yeast)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10624 10624]
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{{#set: reaction found=3}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18030 18030]
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{{#set: reaction not found=0}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00149 R00149]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/O15829 O15829]
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** [http://www.uniprot.org/uniprot/O15830 O15830]
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** [http://www.uniprot.org/uniprot/P07756 P07756]
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** [http://www.uniprot.org/uniprot/P31327 P31327]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=carbamoyl_phosphate_synthetase}}
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{{#set: common name=protein_pyr1-3}}
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{{#set: ec number=EC-6.3.4.16}}
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{{#set: gene associated=Tiso_gene_4976|Tiso_gene_4975|Tiso_gene_4685}}
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{{#set: in pathway=PWY-4984}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:04, 10 January 2018

Reaction RXN-13202

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • carbamoyl_phosphate_synthetase
    • protein_pyr1-3
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 ATP[c] + 1 hydrogencarbonate[c] + 1 ammonium[c] => 2 ADP[c] + 1 carbamoyl phosphate[c] + 1 phosphate[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4984, urea cycle: PWY-4984
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRNA-uridine34&oldid=11432"