Difference between revisions of "PWY-5196"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7783 PWY-7783] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14788 RXN-14788] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7783 PWY-7783] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14788 RXN-14788] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** plasmalogen degradation
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** thiolase
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** acetyl-_c-acetyltransferase
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** 3-ketoacyl-_thiolase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''2''' reaction(s) found
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* With identifiers:
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** [[RXN-17735]]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-15676]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15677]][c]
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** [[RXN-17736]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 coenzyme A[c] '''+''' 1 6-trans-3-oxo-tridecenoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 4-trans-undecenoyl-CoA[c]
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* '''6''' reaction(s) not found
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17741 RXN-17741]
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== Genes associated with this reaction ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17740 RXN-17740]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=3.3.2.5-RXN 3.3.2.5-RXN]
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* [[Tiso_gene_10116]]
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** [http://metacyc.org/META/NEW-IMAGE?object=3.3.2.2-RXN 3.3.2.2-RXN]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17737 RXN-17737]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17738 RXN-17738]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3856]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17451]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15327]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7338]], 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7338 PWY-7338]
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** '''3''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
 +
* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=plasmalogen degradation}}
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{{#set: common name=thiolase}}
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{{#set: reaction found=2}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: reaction not found=6}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: gene associated=Tiso_gene_10116|Tiso_gene_3856|Tiso_gene_17451|Tiso_gene_3855|Tiso_gene_15327}}
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{{#set: in pathway=PWY-7338}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:04, 10 January 2018

Reaction RXN-14788

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 6-trans-3-oxo-tridecenoyl-CoA[c] => 1 acetyl-CoA[c] + 1 4-trans-undecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7338, 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast): PWY-7338
    • 3 reactions found over 12 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5196&oldid=11453"