Difference between revisions of "CPD-17263"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Gene == Gene Tiso_gene_17566 == * left end position: ** 23 * transcription direction: ** POSITIVE * right end position: ** 2739 * centisome position: ** 0.6369427...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] ==
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== Gene Tiso_gene_17566 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 23
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* common name:
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* transcription direction:
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** assimilatory_nitrate_reductase
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** POSITIVE
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** ORF
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* right end position:
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* ec number:
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** 2739
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** [http://enzyme.expasy.org/EC/1.7.1.1 EC-1.7.1.1]
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* centisome position:
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** 0.6369427   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GLUC1PURIDYLTRANS-RXN]]
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** 1 [[NITRATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NITRITE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 nitrate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''=>''' 1 nitrite[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16889]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[UG1PUT]]
 
** [[pantograph]]-[[creinhardtii]]
 
** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_18918]]
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* [[UTPHEXPURIDYLYLTRANS-RXN]]
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***automated-name-match
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** EXPERIMENTAL_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[PWY-7238]]
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== Pathways ==
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* [[PWY-7343]]
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* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
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* [[PWY-3801]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-3821]]
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== Reconstruction information  ==
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* [[PWY-7817]]
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* [[orthology]]:
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* [[PWY-6527]]
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=23}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17913 17913]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2739}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
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{{#set: centisome position=0.6369427    }}
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* UNIPROT:
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{{#set: reaction associated=GLUC1PURIDYLTRANS-RXN|UG1PUT|UTPHEXPURIDYLYLTRANS-RXN}}
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** [http://www.uniprot.org/uniprot/Q39607 Q39607]
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{{#set: pathway associated=PWY-7238|PWY-7343|PWY-3801|PWY-3821|PWY-7817|PWY-6527}}
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** [http://www.uniprot.org/uniprot/Q41201 Q41201]
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** [http://www.uniprot.org/uniprot/P17569 P17569]
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** [http://www.uniprot.org/uniprot/P54233 P54233]
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** [http://www.uniprot.org/uniprot/P36841 P36841]
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** [http://www.uniprot.org/uniprot/P27967 P27967]
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** [http://www.uniprot.org/uniprot/P27969 P27969]
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** [http://www.uniprot.org/uniprot/P11035 P11035]
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** [http://www.uniprot.org/uniprot/P08509 P08509]
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** [http://www.uniprot.org/uniprot/P11605 P11605]
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** [http://www.uniprot.org/uniprot/P23312 P23312]
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** [http://www.uniprot.org/uniprot/P17570 P17570]
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** [http://www.uniprot.org/uniprot/P16081 P16081]
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** [http://www.uniprot.org/uniprot/Q01170 Q01170]
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** [http://www.uniprot.org/uniprot/P39865 P39865]
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** [http://www.uniprot.org/uniprot/P11832 P11832]
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** [http://www.uniprot.org/uniprot/P39869 P39869]
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** [http://www.uniprot.org/uniprot/Q43265 Q43265]
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** [http://www.uniprot.org/uniprot/P43101 P43101]
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** [http://www.uniprot.org/uniprot/P43100 P43100]
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** [http://www.uniprot.org/uniprot/Q42497 Q42497]
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** [http://www.uniprot.org/uniprot/P39866 P39866]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=assimilatory_nitrate_reductase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.7.1.1}}
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{{#set: gene associated=Tiso_gene_16889|Tiso_gene_18918}}
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{{#set: in pathway=PWY-381}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:05, 10 January 2018

Gene Tiso_gene_17566

  • left end position:
    • 23
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2739
  • centisome position:
    • 0.6369427
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-17263&oldid=11535"