Difference between revisions of "GLYCOLLATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.160-RXN 2.7.1.160-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Putative tRNA 2'-ph...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCDP DCDP] == * smiles: ** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP(OP(=O)([O-])[O-])([O-])=O * i...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.160-RXN 2.7.1.160-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCDP DCDP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP(OP(=O)([O-])[O-])([O-])=O
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* inchi key:
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** InChIKey=FTDHDKPUHBLBTL-SHYZEUOFSA-K
 
* common name:
 
* common name:
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** Putative tRNA 2'-phosphotransferase
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** dCDP
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.7.1.160 EC-2.7.1.160]
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** 384.155   
 
* Synonym(s):
 
* Synonym(s):
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** 2'-deoxycytidine diphosphate
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** 2'-deoxycytidine-5'-diphosphate
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** deoxycytidine-diphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[ATDCD]]
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** 1 [[NAD]][c] '''+''' 1 [[2-phospho-ligated-tRNA]][c] '''=>''' 1 [[Spliced-tRNA-precursor]][c] '''+''' 1 [[NIACINAMIDE]][c] '''+''' 1 [[CPD-9007]][c]
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* [[DCDPKIN-RXN]]
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* With common name(s):
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* [[RXN-14187]]
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** 1 NAD+[c] '''+''' 1 a 2'-phospho-[ligated tRNA][c] '''=>''' 1 a spliced tRNA[c] '''+''' 1 nicotinamide[c] '''+''' 1 ADP ribose 1'',2''-cyclic phosphate[c]
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* [[ATDCDm]]
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== Reaction(s) known to produce the compound ==
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== Genes associated with this reaction  ==
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* [[RXN-7913]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ATDCMf]]
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* [[Tiso_gene_17372]]
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* [[ATDCM]]
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** EXPERIMENTAL_ANNOTATION
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* [[CDPREDUCT-RXN]]
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***AUTOMATED-NAME-MATCH
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* [[DCTCP]]
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== Pathways  ==
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* [[DCTUP]]
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* [[PWY-6689]], tRNA splicing I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689]
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* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[RXN-14216]]
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== Reconstruction information  ==
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== Reaction(s) of unknown directionality ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 800-73-7
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{{#set: common name=Putative tRNA 2'-phosphotransferase}}
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* METABOLIGHTS : MTBLC58593
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{{#set: ec number=EC-2.7.1.160}}
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* PUBCHEM:
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{{#set: gene associated=Tiso_gene_17372}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21122964 21122964]
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{{#set: in pathway=PWY-6689}}
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* HMDB : HMDB01245
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{{#set: reconstruction category=annotation}}
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* LIGAND-CPD:
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{{#set: reconstruction tool=pathwaytools}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00705 C00705]
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{{#set: reconstruction source=experimental_annotation}}
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.19986689.html 19986689]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58593 58593]
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* BIGG : dcdp
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{{#set: smiles=C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP(OP(=O)([O-])[O-])([O-])=O}}
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{{#set: inchi key=InChIKey=FTDHDKPUHBLBTL-SHYZEUOFSA-K}}
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{{#set: common name=dCDP}}
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{{#set: molecular weight=384.155    }}
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{{#set: common name=2'-deoxycytidine diphosphate|2'-deoxycytidine-5'-diphosphate|deoxycytidine-diphosphate}}
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{{#set: consumed by=ATDCD|DCDPKIN-RXN|RXN-14187|ATDCDm}}
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{{#set: produced by=RXN-7913|ATDCMf|ATDCM|CDPREDUCT-RXN|DCTCP|DCTUP|RIBONUCLEOSIDE-DIP-REDUCTII-RXN|RXN-14216}}

Revision as of 17:16, 10 January 2018

Metabolite DCDP

  • smiles:
    • C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP(OP(=O)([O-])[O-])([O-])=O
  • inchi key:
    • InChIKey=FTDHDKPUHBLBTL-SHYZEUOFSA-K
  • common name:
    • dCDP
  • molecular weight:
    • 384.155
  • Synonym(s):
    • 2'-deoxycytidine diphosphate
    • 2'-deoxycytidine-5'-diphosphate
    • deoxycytidine-diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 800-73-7
  • METABOLIGHTS : MTBLC58593
  • PUBCHEM:
  • HMDB : HMDB01245
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : dcdp
"C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP(OP(=O)([O-])[O-])([O-])=O" cannot be used as a page name in this wiki.




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