Difference between revisions of "RIBOKIN-PWY"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7414 CPD-7414] == * smiles: ** CC(=CC=CC=C(C)C=CC=C(C)C=CC1(C(C)(C)CCC=C(C)1))C=CC=C(C)C=CC...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7414 CPD-7414] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] ==
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* smiles:
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* direction:
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** CC(=CC=CC=C(C)C=CC=C(C)C=CC1(C(C)(C)CCC=C(C)1))C=CC=C(C)C=CC2(C(C)=CCCC(C)(C)2)
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=QABFXOMOOYWZLZ-GDBZIMIPSA-N
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** [http://enzyme.expasy.org/EC/4.1.1.25 EC-4.1.1.25]
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* common name:
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** ε-carotene
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* molecular weight:
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** 536.882   
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* Synonym(s):
 
* Synonym(s):
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** ε,ε-carotene
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-8028]]
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** 1 [[PROTON]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[TYRAMINE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 H+[c] '''+''' 1 L-tyrosine[c] '''=>''' 1 CO2[c] '''+''' 1 tyramine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3686]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6133]], (S)-reticuline biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6133 PWY-6133]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5254]], methanofuran biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5254 PWY-5254]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7826]], Amaryllidacea alkaloids biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7826 PWY-7826]
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** '''2''' reactions found over '''25''' reactions in the full pathway
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* [[PWY-7297]], octopamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7297 PWY-7297]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5474]], hydroxycinnamic acid tyramine amides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5474 PWY-5474]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6802]], salidroside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6802 PWY-6802]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=12358808 12358808]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14345 14345]
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* LIGAND-CPD:
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?C16276 C16276]
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** [http://www.genome.jp/dbget-bin/www_bget?R00736 R00736]
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{{#set: smiles=CC(=CC=CC=C(C)C=CC=C(C)C=CC1(C(C)(C)CCC=C(C)1))C=CC=C(C)C=CC2(C(C)=CCCC(C)(C)2)}}
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* UNIPROT:
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{{#set: inchi key=InChIKey=QABFXOMOOYWZLZ-GDBZIMIPSA-N}}
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** [http://www.uniprot.org/uniprot/Q06086 Q06086]
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{{#set: common name=ε-carotene}}
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** [http://www.uniprot.org/uniprot/P54768 P54768]
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{{#set: molecular weight=536.882    }}
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** [http://www.uniprot.org/uniprot/P54769 P54769]
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{{#set: common name=ε,ε-carotene}}
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** [http://www.uniprot.org/uniprot/P54770 P54770]
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{{#set: produced by=RXN-8028}}
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** [http://www.uniprot.org/uniprot/O82417 O82417]
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** [http://www.uniprot.org/uniprot/P54771 P54771]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-4.1.1.25}}
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{{#set: gene associated=Tiso_gene_3686}}
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{{#set: in pathway=PWY-3581|PWY-6133|PWY-5254|PWY-7826|PWY-7297|PWY-5474|PWY-6802}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}

Revision as of 17:16, 10 January 2018

Reaction TYROSINE-DECARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 L-tyrosine[c] => 1 CO2[c] + 1 tyramine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3581, (S)-reticuline biosynthesis I: PWY-3581
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-6133, (S)-reticuline biosynthesis II: PWY-6133
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5254, methanofuran biosynthesis: PWY-5254
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7826, Amaryllidacea alkaloids biosynthesis: PWY-7826
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-7297, octopamine biosynthesis: PWY-7297
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5474, hydroxycinnamic acid tyramine amides biosynthesis: PWY-5474
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6802, salidroside biosynthesis: PWY-6802
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RIBOKIN-PWY&oldid=12222"