Difference between revisions of "Tiso gene 3385"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5408 RXN0-5408] == * direction: ** LEFT-TO-RIGHT * common name: ** myo-inositol-1(or_4)-monoph...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7046 PWY-7046] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5408 RXN0-5408] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7046 PWY-7046] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** myo-inositol-1(or_4)-monophosphatase
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** 4-coumarate degradation (anaerobic)
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.25 EC-3.1.3.25]
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* Synonym(s):
 
* Synonym(s):
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** p-coumarate degradation (anaerobic)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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* '''2''' reaction(s) found
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** 1 [[WATER]][c] '''+''' 1 [[D-MYO-INOSITOL-1-MONOPHOSPHATE]][c] '''=>''' 1 [[MYO-INOSITOL]][c] '''+''' 1 [[Pi]][c]
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** [[4-COUMARATE--COA-LIGASE-RXN]]
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* With common name(s):
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** [[RXN-11244]]
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** 1 H2O[c] '''+''' 1 1D-myo-inositol 1-monophosphate[c] '''=>''' 1 myo-inositol[c] '''+''' 1 phosphate[c]
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== Reaction(s) not found ==
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* '''4''' reaction(s) not found
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== Genes associated with this reaction ==
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** [http://metacyc.org/META/NEW-IMAGE?object=OHBENZCOARED-RXN OHBENZCOARED-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-13394 RXN-13394]
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* [[Tiso_gene_12601]]
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** [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBENZOATE--COA-LIGASE-RXN 4-HYDROXYBENZOATE--COA-LIGASE-RXN]
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** [[pantograph]]-[[esiliculosus]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-13392 RXN-13392]
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* [[Tiso_gene_11614]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_4855]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14713]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_10754]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2527]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-4702]], phytate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4702 PWY-4702]
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** '''2''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27670 27670]
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{{#set: common name=4-coumarate degradation (anaerobic)}}
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* LIGAND-RXN:
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{{#set: common name=p-coumarate degradation (anaerobic)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01185 R01185]
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{{#set: reaction found=2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction not found=4}}
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{{#set: common name=myo-inositol-1(or_4)-monophosphatase}}
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{{#set: ec number=EC-3.1.3.25}}
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{{#set: gene associated=Tiso_gene_12601|Tiso_gene_11614|Tiso_gene_4855|Tiso_gene_14713|Tiso_gene_10754|Tiso_gene_2527}}
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{{#set: in pathway=PWY-4702}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:19, 10 January 2018

Pathway PWY-7046

  • taxonomic range:
  • common name:
    • 4-coumarate degradation (anaerobic)
  • Synonym(s):
    • p-coumarate degradation (anaerobic)

Reaction(s) found

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3385&oldid=12376"