Difference between revisions of "2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10701 RXN-10701] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** 3-ketoacyl-_thi...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10701 RXN-10701] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** thiolase
+
** 3-dehydroquinate_synthase
−
** 3-ketoacyl-_thiolase
+
** pentafunctional_protein
−
** acetyl-_c-acetyltransferase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/4.2.3.4 EC-4.2.3.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[CPD-11528]][c] '''=>''' 1 [[CPD-11529]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''=>''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 OPC4-3-ketoacyl-CoA[c] '''=>''' 1 jasmonoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
+
** 1 3-deoxy-D-arabino-heptulosonate 7-phosphate[c] '''=>''' 1 3-dehydroquinate[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10116]]
+
* [[Tiso_gene_3445]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
* [[Tiso_gene_3974]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_3855]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
** [[pantograph]]-[[athaliana]]
−
***EC-NUMBER
+
** [[pantograph]]-[[synechocystis]]
−
* [[Tiso_gene_3856]]
+
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_3447]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_5753]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_15327]]
+
* [[Tiso_gene_3446]]
−
** EXPERIMENTAL_ANNOTATION
+
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_17451]]
+
* [[Tiso_gene_5752]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
+
* [[PWY-6164]], 3-dehydroquinate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164]
−
** '''15''' reactions found over '''19''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[synechocystis]]
 +
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[manual]]:
 +
** [[primary_network]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21968 21968]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03083 R03083]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P07547 P07547]
 +
** [http://www.uniprot.org/uniprot/P08566 P08566]
 +
** [http://www.uniprot.org/uniprot/Q9CES8 Q9CES8]
 +
** [http://www.uniprot.org/uniprot/Q9PNT2 Q9PNT2]
 +
** [http://www.uniprot.org/uniprot/P43879 P43879]
 +
** [http://www.uniprot.org/uniprot/Q9JVW5 Q9JVW5]
 +
** [http://www.uniprot.org/uniprot/P0A4Z4 P0A4Z4]
 +
** [http://www.uniprot.org/uniprot/P07639 P07639]
 +
** [http://www.uniprot.org/uniprot/Q9P7R0 Q9P7R0]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=thiolase}}
+
{{#set: common name=3-dehydroquinate_synthase}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: common name=pentafunctional_protein}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: ec number=EC-4.2.3.4}}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: gene associated=Tiso_gene_3445|Tiso_gene_3974|Tiso_gene_3447|Tiso_gene_5753|Tiso_gene_3446|Tiso_gene_5752}}
−
{{#set: gene associated=Tiso_gene_10116|Tiso_gene_3855|Tiso_gene_3856|Tiso_gene_15327|Tiso_gene_17451}}
+
{{#set: in pathway=PWY-6164}}
−
{{#set: in pathway=PWY-735}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:21, 10 January 2018

Reaction 3-DEHYDROQUINATE-SYNTHASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-dehydroquinate_synthase
    • pentafunctional_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6164, 3-dehydroquinate biosynthesis I: PWY-6164
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links








Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN&oldid=12560"