Difference between revisions of "Tiso gene 8141"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XYLULOKIN-RXN XYLULOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** xylulose_kinase **...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIACYLGLYCEROL-LIPASE-RXN TRIACYLGLYCEROL-LIPASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XYLULOKIN-RXN XYLULOKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIACYLGLYCEROL-LIPASE-RXN TRIACYLGLYCEROL-LIPASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** xylulose_kinase
+
** ORF
−
** xylulokinase_homolog
+
** zinc_finger_fyve_domain-containing_protein
 +
** triacylglycerol_lipase
 +
** class_3_lipase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.17 EC-2.7.1.17]
+
** [http://enzyme.expasy.org/EC/3.1.1.3 EC-3.1.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[D-XYLULOSE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[XYLULOSE-5-PHOSPHATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[Triacylglycerides]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Fatty-Acids]][c] '''+''' 1 [[1-2-Diglycerides]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-xylulose[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 D-xylulose 5-phosphate[c] '''+''' 1 H+[c]
+
** 1 H2O[c] '''+''' 1 a triglyceride[c] '''=>''' 1 H+[c] '''+''' 1 a fatty acid[c] '''+''' 1 a 1,2-diglyceride[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15822]]
+
* [[Tiso_gene_14109]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
* [[Tiso_gene_14270]]
+
* [[Tiso_gene_17613]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_17614]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_16817]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_2983]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_905]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14062]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_17143]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2109]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5716]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_7915]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14064]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_906]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14063]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_9140]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3215]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_11437]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_17639]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_19184]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_17612]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_8902]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_15823]]
+
* [[Tiso_gene_288]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[athaliana]]
+
* [[Tiso_gene_2108]]
−
** [[pantograph]]-[[esiliculosus]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[LARABITOLUTIL-PWY]], xylitol degradation: [http://metacyc.org/META/NEW-IMAGE?object=LARABITOLUTIL-PWY LARABITOLUTIL-PWY]
+
* [[LIPAS-PWY]], triacylglycerol degradation: [http://metacyc.org/META/NEW-IMAGE?object=LIPAS-PWY LIPAS-PWY]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[DARABITOLUTIL-PWY]], D-arabitol degradation: [http://metacyc.org/META/NEW-IMAGE?object=DARABITOLUTIL-PWY DARABITOLUTIL-PWY]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[XYLCAT-PWY]], xylose degradation I: [http://metacyc.org/META/NEW-IMAGE?object=XYLCAT-PWY XYLCAT-PWY]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
−
*** [[athaliana]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10964 10964]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01639 R01639]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01369 R01369]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P27156 P27156]
+
** [http://www.uniprot.org/uniprot/P10335 P10335]
−
** [http://www.uniprot.org/uniprot/Q9CFG8 Q9CFG8]
+
** [http://www.uniprot.org/uniprot/P07867 P07867]
−
** [http://www.uniprot.org/uniprot/P35850 P35850]
+
** [http://www.uniprot.org/uniprot/P11150 P11150]
−
** [http://www.uniprot.org/uniprot/P09099 P09099]
+
** [http://www.uniprot.org/uniprot/P17892 P17892]
−
** [http://www.uniprot.org/uniprot/P12867 P12867]
+
** [http://www.uniprot.org/uniprot/P24484 P24484]
−
** [http://www.uniprot.org/uniprot/P27155 P27155]
+
** [http://www.uniprot.org/uniprot/Q9TSB3 Q9TSB3]
−
** [http://www.uniprot.org/uniprot/P21939 P21939]
+
** [http://www.uniprot.org/uniprot/P40601 P40601]
−
** [http://www.uniprot.org/uniprot/P29444 P29444]
+
** [http://www.uniprot.org/uniprot/P0C0R3 P0C0R3]
−
** [http://www.uniprot.org/uniprot/Q9X714 Q9X714]
+
** [http://www.uniprot.org/uniprot/Q05489 Q05489]
 +
** [http://www.uniprot.org/uniprot/P81139 P81139]
 +
** [http://www.uniprot.org/uniprot/P17573 P17573]
 +
** [http://www.uniprot.org/uniprot/P16233 P16233]
 +
** [http://www.uniprot.org/uniprot/Q64425 Q64425]
 +
** [http://www.uniprot.org/uniprot/Q29458 Q29458]
 +
** [http://www.uniprot.org/uniprot/Q59537 Q59537]
 +
** [http://www.uniprot.org/uniprot/Q59538 Q59538]
 +
** [http://www.uniprot.org/uniprot/Q59539 Q59539]
 +
** [http://www.uniprot.org/uniprot/P32947 P32947]
 +
** [http://www.uniprot.org/uniprot/P32948 P32948]
 +
** [http://www.uniprot.org/uniprot/P32949 P32949]
 +
** [http://www.uniprot.org/uniprot/P26504 P26504]
 +
** [http://www.uniprot.org/uniprot/P61872 P61872]
 +
** [http://www.uniprot.org/uniprot/Q59932 Q59932]
 +
** [http://www.uniprot.org/uniprot/P61871 P61871]
 +
** [http://www.uniprot.org/uniprot/O66015 O66015]
 +
** [http://www.uniprot.org/uniprot/Q02351 Q02351]
 +
** [http://www.uniprot.org/uniprot/P06857 P06857]
 +
** [http://www.uniprot.org/uniprot/P04634 P04634]
 +
** [http://www.uniprot.org/uniprot/P22394 P22394]
 +
** [http://www.uniprot.org/uniprot/P29605 P29605]
 +
** [http://www.uniprot.org/uniprot/P16386 P16386]
 +
** [http://www.uniprot.org/uniprot/P08658 P08658]
 +
** [http://www.uniprot.org/uniprot/P07098 P07098]
 +
** [http://www.uniprot.org/uniprot/Q9UP41 Q9UP41]
 +
** [http://www.uniprot.org/uniprot/P24640 P24640]
 +
** [http://www.uniprot.org/uniprot/Q8VC44 Q8VC44]
 +
** [http://www.uniprot.org/uniprot/P54316 P54316]
 +
** [http://www.uniprot.org/uniprot/P29183 P29183]
 +
** [http://www.uniprot.org/uniprot/P20261 P20261]
 +
** [http://www.uniprot.org/uniprot/Q28681 Q28681]
 +
** [http://www.uniprot.org/uniprot/P26876 P26876]
 +
** [http://www.uniprot.org/uniprot/P32946 P32946]
 +
** [http://www.uniprot.org/uniprot/P34163 P34163]
 +
** [http://www.uniprot.org/uniprot/P50903 P50903]
 +
** [http://www.uniprot.org/uniprot/P41365 P41365]
 +
** [http://www.uniprot.org/uniprot/Q02104 Q02104]
 +
** [http://www.uniprot.org/uniprot/Q12616 Q12616]
 +
** [http://www.uniprot.org/uniprot/Q12614 Q12614]
 +
** [http://www.uniprot.org/uniprot/Q59811 Q59811]
 +
** [http://www.uniprot.org/uniprot/P75268 P75268]
 +
** [http://www.uniprot.org/uniprot/Q48992 Q48992]
 +
** [http://www.uniprot.org/uniprot/P78898 P78898]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=xylulose_kinase}}
+
{{#set: common name=ORF}}
−
{{#set: common name=xylulokinase_homolog}}
+
{{#set: common name=zinc_finger_fyve_domain-containing_protein}}
−
{{#set: ec number=EC-2.7.1.17}}
+
{{#set: common name=triacylglycerol_lipase}}
−
{{#set: gene associated=Tiso_gene_15822|Tiso_gene_14270|Tiso_gene_15823}}
+
{{#set: common name=class_3_lipase}}
−
{{#set: in pathway=LARABITOLUTIL-PWY|DARABITOLUTIL-PWY|XYLCAT-PWY}}
+
{{#set: ec number=EC-3.1.1.3}}
 +
{{#set: gene associated=Tiso_gene_14109|Tiso_gene_17613|Tiso_gene_17614|Tiso_gene_16817|Tiso_gene_2983|Tiso_gene_905|Tiso_gene_14062|Tiso_gene_17143|Tiso_gene_2109|Tiso_gene_5716|Tiso_gene_7915|Tiso_gene_14064|Tiso_gene_906|Tiso_gene_14063|Tiso_gene_9140|Tiso_gene_3215|Tiso_gene_11437|Tiso_gene_17639|Tiso_gene_19184|Tiso_gene_17612|Tiso_gene_8902|Tiso_gene_288|Tiso_gene_2108}}
 +
{{#set: in pathway=LIPAS-PWY}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus|athaliana}}
+
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:25, 10 January 2018

Reaction TRIACYLGLYCEROL-LIPASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • zinc_finger_fyve_domain-containing_protein
    • triacylglycerol_lipase
    • class_3_lipase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • LIPAS-PWY, triacylglycerol degradation: LIPAS-PWY
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links








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