Difference between revisions of "Halide-Anions"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIACYLGLYCEROL-LIPASE-RXN TRIACYLGLYCEROL-LIPASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Gene == Gene Tiso_gene_4492 == * left end position: ** 8290 * transcription direction: ** POSITIVE * right end position: ** 11272 * centisome position: ** 56.0400...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIACYLGLYCEROL-LIPASE-RXN TRIACYLGLYCEROL-LIPASE-RXN] ==
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== Gene Tiso_gene_4492 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 8290
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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** zinc_finger_fyve_domain-containing_protein
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* right end position:
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** triacylglycerol_lipase
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** 11272
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** class_3_lipase
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* centisome position:
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* ec number:
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** 56.04002   
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** [http://enzyme.expasy.org/EC/3.1.1.3 EC-3.1.1.3]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[SERINE-O-ACETTRAN-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[Triacylglycerides]][c] '''=>''' 1 [[Fatty-Acids]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[1-2-Diglycerides]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 a triglyceride[c] '''=>''' 1 a fatty acid[c] '''+''' 1 H+[c] '''+''' 1 a 1,2-diglyceride[c]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_288]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16817]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2983]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7915]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9140]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14062]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5716]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3215]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17143]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14063]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_906]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17639]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2108]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14109]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17613]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2109]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19184]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17614]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8902]]
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** [[pantograph]]-[[creinhardtii]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[creinhardtii]]
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***AUTOMATED-NAME-MATCH
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== Pathways associated ==
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* [[Tiso_gene_905]]
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* [[CYSTSYN-PWY]]
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** IN-SILICO_ANNOTATION
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* [[PWY-7274]]
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***EC-NUMBER
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* [[PWY-6936]]
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* [[Tiso_gene_14064]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17612]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11437]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[LIPAS-PWY]], triacylglycerol degradation: [http://metacyc.org/META/NEW-IMAGE?object=LIPAS-PWY LIPAS-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=8290}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01369 R01369]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=11272}}
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** [http://www.uniprot.org/uniprot/P10335 P10335]
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{{#set: centisome position=56.04002    }}
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** [http://www.uniprot.org/uniprot/P07867 P07867]
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{{#set: reaction associated=SERINE-O-ACETTRAN-RXN}}
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** [http://www.uniprot.org/uniprot/P11150 P11150]
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{{#set: pathway associated=CYSTSYN-PWY|PWY-7274|PWY-6936}}
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** [http://www.uniprot.org/uniprot/P17892 P17892]
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** [http://www.uniprot.org/uniprot/P24484 P24484]
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** [http://www.uniprot.org/uniprot/Q9TSB3 Q9TSB3]
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** [http://www.uniprot.org/uniprot/P40601 P40601]
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** [http://www.uniprot.org/uniprot/P0C0R3 P0C0R3]
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** [http://www.uniprot.org/uniprot/Q05489 Q05489]
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** [http://www.uniprot.org/uniprot/P81139 P81139]
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** [http://www.uniprot.org/uniprot/P17573 P17573]
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** [http://www.uniprot.org/uniprot/P16233 P16233]
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** [http://www.uniprot.org/uniprot/Q64425 Q64425]
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** [http://www.uniprot.org/uniprot/Q29458 Q29458]
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** [http://www.uniprot.org/uniprot/Q59537 Q59537]
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** [http://www.uniprot.org/uniprot/Q59538 Q59538]
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** [http://www.uniprot.org/uniprot/Q59539 Q59539]
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** [http://www.uniprot.org/uniprot/P32947 P32947]
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** [http://www.uniprot.org/uniprot/P32948 P32948]
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** [http://www.uniprot.org/uniprot/P32949 P32949]
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** [http://www.uniprot.org/uniprot/P26504 P26504]
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** [http://www.uniprot.org/uniprot/P61872 P61872]
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** [http://www.uniprot.org/uniprot/Q59932 Q59932]
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** [http://www.uniprot.org/uniprot/P61871 P61871]
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** [http://www.uniprot.org/uniprot/O66015 O66015]
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** [http://www.uniprot.org/uniprot/Q02351 Q02351]
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** [http://www.uniprot.org/uniprot/P06857 P06857]
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** [http://www.uniprot.org/uniprot/P04634 P04634]
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** [http://www.uniprot.org/uniprot/P22394 P22394]
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** [http://www.uniprot.org/uniprot/P29605 P29605]
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** [http://www.uniprot.org/uniprot/P16386 P16386]
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** [http://www.uniprot.org/uniprot/P08658 P08658]
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** [http://www.uniprot.org/uniprot/P07098 P07098]
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** [http://www.uniprot.org/uniprot/Q9UP41 Q9UP41]
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** [http://www.uniprot.org/uniprot/P24640 P24640]
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** [http://www.uniprot.org/uniprot/Q8VC44 Q8VC44]
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** [http://www.uniprot.org/uniprot/P54316 P54316]
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** [http://www.uniprot.org/uniprot/P29183 P29183]
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** [http://www.uniprot.org/uniprot/P20261 P20261]
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** [http://www.uniprot.org/uniprot/Q28681 Q28681]
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** [http://www.uniprot.org/uniprot/P26876 P26876]
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** [http://www.uniprot.org/uniprot/P32946 P32946]
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** [http://www.uniprot.org/uniprot/P34163 P34163]
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** [http://www.uniprot.org/uniprot/P50903 P50903]
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** [http://www.uniprot.org/uniprot/P41365 P41365]
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** [http://www.uniprot.org/uniprot/Q02104 Q02104]
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** [http://www.uniprot.org/uniprot/Q12616 Q12616]
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** [http://www.uniprot.org/uniprot/Q12614 Q12614]
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** [http://www.uniprot.org/uniprot/Q59811 Q59811]
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** [http://www.uniprot.org/uniprot/P75268 P75268]
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** [http://www.uniprot.org/uniprot/Q48992 Q48992]
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** [http://www.uniprot.org/uniprot/P78898 P78898]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=zinc_finger_fyve_domain-containing_protein}}
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{{#set: common name=triacylglycerol_lipase}}
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{{#set: common name=class_3_lipase}}
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{{#set: ec number=EC-3.1.1.3}}
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{{#set: gene associated=Tiso_gene_288|Tiso_gene_16817|Tiso_gene_2983|Tiso_gene_7915|Tiso_gene_9140|Tiso_gene_14062|Tiso_gene_5716|Tiso_gene_3215|Tiso_gene_17143|Tiso_gene_14063|Tiso_gene_906|Tiso_gene_17639|Tiso_gene_2108|Tiso_gene_14109|Tiso_gene_17613|Tiso_gene_2109|Tiso_gene_19184|Tiso_gene_17614|Tiso_gene_8902|Tiso_gene_905|Tiso_gene_14064|Tiso_gene_17612|Tiso_gene_11437}}
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{{#set: in pathway=LIPAS-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:26, 10 January 2018

Gene Tiso_gene_4492

  • left end position:
    • 8290
  • transcription direction:
    • POSITIVE
  • right end position:
    • 11272
  • centisome position:
    • 56.04002
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Halide-Anions&oldid=12938"