Difference between revisions of "PROSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-GLN-FRUCT-6-P-AMINOTRANS-RXN L-GLN-FRUCT-6-P-AMINOTRANS-RXN] == * direction: ** REVERSIBLE * comm...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosylami...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-GLN-FRUCT-6-P-AMINOTRANS-RXN L-GLN-FRUCT-6-P-AMINOTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** glutamine--fructose-6-phosphate_aminotransferase
+
** phosphoribosylaminoimidazole_carboxylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.16 EC-2.6.1.16]
+
** [http://enzyme.expasy.org/EC/4.1.1.21 EC-4.1.1.21]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[GLN]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[D-GLUCOSAMINE-6-P]][c]
+
** 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 &beta;-D-fructofuranose 6-phosphate[c] '''+''' 1 L-glutamine[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 D-glucosamine 6-phosphate[c]
+
** 1 5-amino-1-(5-phospho-&beta;-D-ribosyl)imidazole[c] '''+''' 1 CO2[c] '''=>''' 2 H+[c] '''+''' 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9051]]
+
* [[Tiso_gene_16011]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[UDPNACETYLGALSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGALSYN-PWY UDPNACETYLGALSYN-PWY]
+
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6749]], CMP-legionaminate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6749 PWY-6749]
+
−
** '''1''' reactions found over '''10''' reactions in the full pathway
+
−
* [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=UDPNAGSYN-PWY UDPNAGSYN-PWY]
+
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[creinhardtii]]
 
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[manual]]:
 +
** [[primary_network]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13237 13237]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10792 10792]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00768 R00768]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04209 R04209]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q06210 Q06210]
+
** [http://www.uniprot.org/uniprot/Q9RYC6 Q9RYC6]
−
** [http://www.uniprot.org/uniprot/Q9RXK9 Q9RXK9]
+
** [http://www.uniprot.org/uniprot/Q9PPK5 Q9PPK5]
−
** [http://www.uniprot.org/uniprot/P39754 P39754]
+
** [http://www.uniprot.org/uniprot/O66608 O66608]
−
** [http://www.uniprot.org/uniprot/P0A588 P0A588]
+
** [http://www.uniprot.org/uniprot/O67239 O67239]
−
** [http://www.uniprot.org/uniprot/O84823 O84823]
+
** [http://www.uniprot.org/uniprot/P12045 P12045]
−
** [http://www.uniprot.org/uniprot/Q9WXZ5 Q9WXZ5]
+
** [http://www.uniprot.org/uniprot/P09029 P09029]
−
** [http://www.uniprot.org/uniprot/Q9K1P9 Q9K1P9]
+
** [http://www.uniprot.org/uniprot/P12044 P12044]
−
** [http://www.uniprot.org/uniprot/Q9Z6U0 Q9Z6U0]
+
** [http://www.uniprot.org/uniprot/P21264 P21264]
−
** [http://www.uniprot.org/uniprot/Q9PLA4 Q9PLA4]
+
** [http://www.uniprot.org/uniprot/P0AG18 P0AG18]
−
** [http://www.uniprot.org/uniprot/Q58815 Q58815]
+
** [http://www.uniprot.org/uniprot/P15567 P15567]
−
** [http://www.uniprot.org/uniprot/Q9PMT4 Q9PMT4]
+
** [http://www.uniprot.org/uniprot/Q9XAY8 Q9XAY8]
−
** [http://www.uniprot.org/uniprot/P44708 P44708]
+
** [http://www.uniprot.org/uniprot/P43849 P43849]
−
** [http://www.uniprot.org/uniprot/O26060 O26060]
+
** [http://www.uniprot.org/uniprot/Q9JTS6 Q9JTS6]
−
** [http://www.uniprot.org/uniprot/O66648 O66648]
+
** [http://www.uniprot.org/uniprot/P43850 P43850]
−
** [http://www.uniprot.org/uniprot/O83833 O83833]
+
** [http://www.uniprot.org/uniprot/Q58033 Q58033]
−
** [http://www.uniprot.org/uniprot/Q9V249 Q9V249]
+
** [http://www.uniprot.org/uniprot/Q9WYS8 Q9WYS8]
−
** [http://www.uniprot.org/uniprot/O26273 O26273]
+
** [http://www.uniprot.org/uniprot/P22234 P22234]
−
** [http://www.uniprot.org/uniprot/Q9ZJ94 Q9ZJ94]
+
** [http://www.uniprot.org/uniprot/P22348 P22348]
−
** [http://www.uniprot.org/uniprot/Q9JWN9 Q9JWN9]
+
** [http://www.uniprot.org/uniprot/Q01930 Q01930]
−
** [http://www.uniprot.org/uniprot/P47856 P47856]
+
** [http://www.uniprot.org/uniprot/P55195 P55195]
−
** [http://www.uniprot.org/uniprot/P53704 P53704]
+
** [http://www.uniprot.org/uniprot/P50504 P50504]
−
** [http://www.uniprot.org/uniprot/Q56206 Q56206]
+
** [http://www.uniprot.org/uniprot/Q55498 Q55498]
−
** [http://www.uniprot.org/uniprot/P08633 P08633]
+
** [http://www.uniprot.org/uniprot/P74724 P74724]
−
** [http://www.uniprot.org/uniprot/P25195 P25195]
+
** [http://www.uniprot.org/uniprot/O80937 O80937]
−
** [http://www.uniprot.org/uniprot/P40831 P40831]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P72720 P72720]
+
{{#set: common name=phosphoribosylaminoimidazole_carboxylase}}
−
** [http://www.uniprot.org/uniprot/Q09740 Q09740]
+
{{#set: ec number=EC-4.1.1.21}}
−
** [http://www.uniprot.org/uniprot/O19908 O19908]
+
{{#set: gene associated=Tiso_gene_16011}}
−
** [http://www.uniprot.org/uniprot/Q84421 Q84421]
+
{{#set: in pathway=PWY-6124}}
−
** [http://www.uniprot.org/uniprot/Q19130 Q19130]
+
−
** [http://www.uniprot.org/uniprot/Q19699 Q19699]
+
−
** [http://www.uniprot.org/uniprot/O86781 O86781]
+
−
** [http://www.uniprot.org/uniprot/Q9S168 Q9S168]
+
−
** [http://www.uniprot.org/uniprot/Q56275 Q56275]
+
−
** [http://www.uniprot.org/uniprot/P14742 P14742]
+
−
** [http://www.uniprot.org/uniprot/P17169 P17169]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=glutamine--fructose-6-phosphate_aminotransferase}}
+
−
{{#set: ec number=EC-2.6.1.16}}
+
−
{{#set: gene associated=Tiso_gene_9051}}
+
−
{{#set: in pathway=UDPNACETYLGALSYN-PWY|PWY-6749|UDPNAGSYN-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+
{{#set: reconstruction source=esiliculosus|athaliana}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:26, 10 January 2018

Reaction AIRCARBOXY-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoribosylaminoimidazole_carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6124, inosine-5'-phosphate biosynthesis II: PWY-6124
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PROSYN-PWY&oldid=12993"