Difference between revisions of "RXN-8443"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYM-PHOSPH-RXN THYM-PHOSPH-RXN] == * direction: ** REVERSIBLE * common name: ** thymidine_phosphor...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXY-D-RIBOSE-1-PHOSPHATE DEOXY-D-RIBOSE-1-PHOSPHATE] == * smiles: ** C1(C(O)C(CO)OC1OP(=O)([O...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYM-PHOSPH-RXN THYM-PHOSPH-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXY-D-RIBOSE-1-PHOSPHATE DEOXY-D-RIBOSE-1-PHOSPHATE] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C1(C(O)C(CO)OC1OP(=O)([O-])[O-])
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* inchi key:
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** InChIKey=KBDKAJNTYKVSEK-VPENINKCSA-L
 
* common name:
 
* common name:
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** thymidine_phosphorylase
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** 2-deoxy-α-D-ribose 1-phosphate
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.4.2.2 EC-2.4.2.2]
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** 212.096   
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** [http://enzyme.expasy.org/EC/2.4.2.4 EC-2.4.2.4]
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* Synonym(s):
 
* Synonym(s):
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** deoxy-D-ribose 1-phosphate
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** 2-deoxy-D-ribose-1-phosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[THYMIDINE]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c] '''+''' 1 [[THYMINE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[THYM-PHOSPH-RXN]]
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** 1 thymidine[c] '''+''' 1 phosphate[c] '''<=>''' 1 2-deoxy-&alpha;-D-ribose 1-phosphate[c] '''+''' 1 thymine[c]
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* [[URA-PHOSPH-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1011]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7181]], pyrimidine deoxyribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7181 PWY-7181]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16037 16037]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=23419734 23419734]
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* LIGAND-RXN:
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* CHEMSPIDER:
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** [http://www.genome.jp/dbget-bin/www_bget?R01570 R01570]
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** [http://www.chemspider.com/Chemical-Structure.10461471.html 10461471]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P47717 P47717]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57259 57259]
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** [http://www.uniprot.org/uniprot/Q58081 Q58081]
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* BIGG : 2dr1p
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** [http://www.uniprot.org/uniprot/P47297 P47297]
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* HMDB : HMDB01351
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** [http://www.uniprot.org/uniprot/P19971 P19971]
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{{#set: smiles=C1(C(O)C(CO)OC1OP(=O)([O-])[O-])}}
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** [http://www.uniprot.org/uniprot/P19663 P19663]
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{{#set: inchi key=InChIKey=KBDKAJNTYKVSEK-VPENINKCSA-L}}
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** [http://www.uniprot.org/uniprot/P07650 P07650]
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{{#set: common name=2-deoxy-&alpha;-D-ribose 1-phosphate}}
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** [http://www.uniprot.org/uniprot/P75052 P75052]
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{{#set: molecular weight=212.096    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=deoxy-D-ribose 1-phosphate|2-deoxy-D-ribose-1-phosphate}}
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{{#set: common name=thymidine_phosphorylase}}
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{{#set: consumed or produced by=THYM-PHOSPH-RXN|URA-PHOSPH-RXN}}
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{{#set: ec number=EC-2.4.2.2}}
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{{#set: ec number=EC-2.4.2.4}}
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{{#set: gene associated=Tiso_gene_1011}}
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{{#set: in pathway=PWY-7181}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:31, 10 January 2018

Metabolite DEOXY-D-RIBOSE-1-PHOSPHATE

  • smiles:
    • C1(C(O)C(CO)OC1OP(=O)([O-])[O-])
  • inchi key:
    • InChIKey=KBDKAJNTYKVSEK-VPENINKCSA-L
  • common name:
    • 2-deoxy-α-D-ribose 1-phosphate
  • molecular weight:
    • 212.096
  • Synonym(s):
    • deoxy-D-ribose 1-phosphate
    • 2-deoxy-D-ribose-1-phosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C1(C(O)C(CO)OC1OP(=O)([O-])[O-])" cannot be used as a page name in this wiki.



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