Difference between revisions of "PWY-5965"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10546 CPD-10546] == * smiles: ** C1(NC2(C(C=1CC(=O)OC)=CC=CC=2)) * inchi key: ** InChIKey=K...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9528 RXN-9528] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-decanoyl-[acyl-carrier...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10546 CPD-10546] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9528 RXN-9528] ==
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* smiles:
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* direction:
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** C1(NC2(C(C=1CC(=O)OC)=CC=CC=2))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=KTHADMDGDNYQRX-UHFFFAOYSA-N
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* common name:
 
* common name:
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** methyl (indol-3-yl)acetate
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** 3-oxo-decanoyl-[acyl-carrier protein] reductase
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* molecular weight:
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** polyketide_synthase
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** 189.213   
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** 3-oxoacyl-(acyl-carrier-protein)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
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** IAA methyl ester
 
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** methyl IAA
 
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** MeIAA
 
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** indole-3-acetic acid methyl ester
 
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** methyl 2-(1H-indol-3-yl)acetate
 
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** methyl indole-3-acetate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-10711]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-oxo-decanoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Beta-hydroxydecanoyl-ACPs]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a 3-oxo-decanoyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxydecanoyl-[acp][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9885]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16579]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_624]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_13083]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10415]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=74706 74706]
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{{#set: common name=3-oxo-decanoyl-[acyl-carrier protein] reductase}}
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* KNAPSACK : C00000101
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{{#set: common name=polyketide_synthase}}
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* HMDB : HMDB29738
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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* LIGAND-CPD:
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{{#set: ec number=EC-2.3.1.86}}
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** [http://www.genome.jp/dbget-bin/www_bget?C20635 C20635]
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{{#set: ec number=EC-2.3.1.85}}
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* CHEMSPIDER:
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{{#set: ec number=EC-1.1.1.100}}
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** [http://www.chemspider.com/Chemical-Structure.67279.html 67279]
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{{#set: gene associated=Tiso_gene_135|Tiso_gene_500|Tiso_gene_9885|Tiso_gene_136|Tiso_gene_16579|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_624|Tiso_gene_13083|Tiso_gene_10415}}
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* CHEBI:
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{{#set: in pathway=PWY-5971|PWY-5994}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=72782 72782]
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{{#set: reconstruction category=orthology}}
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* METABOLIGHTS : MTBLC72782
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=C1(NC2(C(C=1CC(=O)OC)=CC=CC=2))}}
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{{#set: reconstruction source=synechocystis|esiliculosus}}
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{{#set: inchi key=InChIKey=KTHADMDGDNYQRX-UHFFFAOYSA-N}}
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{{#set: reconstruction category=manual}}
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{{#set: common name=methyl (indol-3-yl)acetate}}
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{{#set: reconstruction source=primary_network}}
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{{#set: molecular weight=189.213    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=IAA methyl ester|methyl IAA|MeIAA|indole-3-acetic acid methyl ester|methyl 2-(1H-indol-3-yl)acetate|methyl indole-3-acetate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: consumed by=RXN-10711}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:31, 10 January 2018

Reaction RXN-9528

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-decanoyl-[acyl-carrier protein] reductase
    • polyketide_synthase
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxo-decanoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.








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