Difference between revisions of "PWY-6473"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLATE-REDUCTASE-RXN GLYCOLATE-REDUCTASE-RXN] == * direction: ** REVERSIBLE * common name: ** Gl...")
 
(Created page with "Category:Gene == Gene Tiso_gene_91 == * left end position: ** 18607 * transcription direction: ** POSITIVE * right end position: ** 19771 * centisome position: ** 41.15773...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLATE-REDUCTASE-RXN GLYCOLATE-REDUCTASE-RXN] ==
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== Gene Tiso_gene_91 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 18607
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* common name:
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* transcription direction:
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** Glyoxylate/succinic semialdehyde reductase 1
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.1.1.26 EC-1.1.1.26]
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** 19771
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* centisome position:
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** 41.157734   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[GLYCOLLATE]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[GLYOX]][c] '''+''' 1 [[NADH]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 NAD+[c] '''+''' 1 glycolate[c] '''<=>''' 1 H+[c] '''+''' 1 glyoxylate[c] '''+''' 1 NADH[c]
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* [[6PGLUCONDEHYDROG-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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* [[GLYCLTD]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_91]]
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* [[GLYCOLATE-REDUCTASE-RXN]]
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** EXPERIMENTAL_ANNOTATION
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** experimental_annotation
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***AUTOMATED-NAME-MATCH
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***automated-name-match
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* [[Tiso_gene_777]]
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* [[GLYOXYLATE-REDUCTASE-NADP+-RXN]]
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** EXPERIMENTAL_ANNOTATION
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** in-silico_annotation
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***AUTOMATED-NAME-MATCH
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***ec-number
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== Pathways ==
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** experimental_annotation
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* [[PWY-7295]], L-arabinose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7295 PWY-7295]
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***ec-number
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[RXN-6903]]
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* [[PWY-7294]], xylose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7294 PWY-7294]
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** in-silico_annotation
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** '''2''' reactions found over '''7''' reactions in the full pathway
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***automated-name-match
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== Reconstruction information  ==
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* [[RXN-9952]]
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* [[annotation]]:
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** [[pantograph]]-[[esiliculosus]]
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** [[pathwaytools]]:
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* [[RXN0-5289]]
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*** [[experimental_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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* [[SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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** experimental_annotation
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***automated-name-match
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== Pathways associated ==
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* [[PWY-4321]]
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* [[GLUDEG-I-PWY]]
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* [[OXIDATIVEPENT-PWY]]
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* [[PWY-7295]]
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* [[PWY-7294]]
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* [[PWY-5022]]
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* [[PWY-6473]]
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* [[PWY-6535]]
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* [[PWY-5677]]
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* [[GLYCOLATEMET-PWY]]
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* [[P122-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=18607}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18229 18229]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=19771}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00717 R00717]
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{{#set: centisome position=41.157734    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN|6PGLUCONDEHYDROG-RXN|GLYCLTD|GLYCOLATE-REDUCTASE-RXN|GLYOXYLATE-REDUCTASE-NADP+-RXN|RXN-6903|RXN-9952|RXN0-5289|SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN}}
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{{#set: common name=Glyoxylate/succinic semialdehyde reductase 1}}
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{{#set: pathway associated=PWY-4321|GLUDEG-I-PWY|OXIDATIVEPENT-PWY|PWY-7295|PWY-7294|PWY-5022|PWY-6473|PWY-6535|PWY-5677|GLYCOLATEMET-PWY|P122-PWY}}
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{{#set: ec number=EC-1.1.1.26}}
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{{#set: gene associated=Tiso_gene_91|Tiso_gene_777}}
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{{#set: in pathway=PWY-7295|PWY-7294}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Revision as of 16:32, 10 January 2018

Gene Tiso_gene_91

  • left end position:
    • 18607
  • transcription direction:
    • POSITIVE
  • right end position:
    • 19771
  • centisome position:
    • 41.157734
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6473&oldid=13393"