Difference between revisions of "PREPHENATEDEHYDROG-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12610 RXN-12610] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** thiamine_monophospha...")
 
(Created page with "Category:Gene == Gene Tiso_gene_8878 == * left end position: ** 7495 * transcription direction: ** POSITIVE * right end position: ** 8991 * centisome position: ** 76.425...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12610 RXN-12610] ==
+
== Gene Tiso_gene_8878 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 7495
−
* common name:
+
* transcription direction:
−
** ORF
+
** POSITIVE
−
** thiamine_monophosphate_synthase
+
* right end position:
−
* ec number:
+
** 8991
−
** [http://enzyme.expasy.org/EC/2.5.1.3 EC-2.5.1.3]
+
* centisome position:
 +
** 76.425   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[NICOTINAMIDE-N-METHYLTRANSFERASE-RXN]]
−
** 2 [[PROTON]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[CPD-13576]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[THIAMINE-P]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 2 H+[c] '''+''' 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''+''' 1 2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 thiamine phosphate[c] '''+''' 1 CO2[c]
+
== Pathways associated ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_2160]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10320]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_2159]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-6907]], thiamine diphosphate biosynthesis III (Staphylococcus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6907 PWY-6907]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6893]], thiamine diphosphate biosynthesis II (Bacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6893 PWY-6893]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=7495}}
−
{{#set: common name=ORF}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=thiamine_monophosphate_synthase}}
+
{{#set: right end position=8991}}
−
{{#set: ec number=EC-2.5.1.3}}
+
{{#set: centisome position=76.425    }}
−
{{#set: gene associated=Tiso_gene_2160|Tiso_gene_10320|Tiso_gene_2159}}
+
{{#set: reaction associated=NICOTINAMIDE-N-METHYLTRANSFERASE-RXN}}
−
{{#set: in pathway=PWY-6907|PWY-6893}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 16:32, 10 January 2018

Gene Tiso_gene_8878

  • left end position:
    • 7495
  • transcription direction:
    • POSITIVE
  • right end position:
    • 8991
  • centisome position:
    • 76.425
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PREPHENATEDEHYDROG-RXN&oldid=13399"