Difference between revisions of "PWY-6505"

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(Created page with "Category:Gene == Gene Tiso_gene_4406 == * left end position: ** 13527 * transcription direction: ** NEGATIVE * right end position: ** 14449 * centisome position: ** 47.801...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_4406 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] ==
* left end position:
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* direction:
** 13527
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/1.13.11.59 EC-1.13.11.59]
* right end position:
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** 14449
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* centisome position:
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** 47.801964   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[THREONINE--TRNA-LIGASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-7953]][c] '''=>''' 1 [[CPD-12935]][c] '''+''' 1 [[PRENAL]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 oxygen[c] '''+''' 1 torulene[c] '''=>''' 1 4'-apo-β-carotenal[c] '''+''' 1 3-methyl-2-butenal[c]
***ec-number
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== Pathways associated ==
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== Genes associated with this reaction  ==
* [[TRNA-CHARGING-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_4653]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7740]]
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** [[pantograph]]-[[esiliculosus]]
 +
== Pathways ==
 +
* [[PWY-6681]], neurosporaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=13527}}
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* RHEA:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31522 31522]
{{#set: right end position=14449}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=47.801964    }}
+
{{#set: ec number=EC-1.13.11.59}}
{{#set: reaction associated=THREONINE--TRNA-LIGASE-RXN}}
+
{{#set: gene associated=Tiso_gene_4653|Tiso_gene_7740}}
{{#set: pathway associated=TRNA-CHARGING-PWY}}
+
{{#set: in pathway=PWY-6681}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}

Revision as of 16:33, 10 January 2018

Reaction RXN-11989

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oxygen[c] + 1 torulene[c] => 1 4'-apo-β-carotenal[c] + 1 3-methyl-2-butenal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6681, neurosporaxanthin biosynthesis: PWY-6681
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links