Difference between revisions of "TRANS-RXN-125"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-5304 RXN3O-5304] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * ec...")
 
(Created page with "Category:Gene == Gene Tiso_gene_7038 == * left end position: ** 618 * transcription direction: ** POSITIVE * right end position: ** 2896 * centisome position: ** 3.5737004...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-5304 RXN3O-5304] ==
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== Gene Tiso_gene_7038 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 618
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* common name:
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* transcription direction:
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** polyketide_synthase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
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** 2896
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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* centisome position:
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** 3.5737004   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[1.5.1.9-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[Stearoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[STEAROYL-COA]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 coenzyme A[c] '''+''' 1 a stearoyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 stearoyl-CoA[c]
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== Pathways associated ==
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* [[LYSINE-DEG1-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=618}}
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{{#set: common name=polyketide_synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.3.1}}
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{{#set: right end position=2896}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: centisome position=3.5737004    }}
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{{#set: gene associated=Tiso_gene_136|Tiso_gene_135|Tiso_gene_500|Tiso_gene_10876|Tiso_gene_13394}}
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{{#set: reaction associated=1.5.1.9-RXN}}
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{{#set: in pathway=PWY3O-355}}
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{{#set: pathway associated=LYSINE-DEG1-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:33, 10 January 2018

Gene Tiso_gene_7038

  • left end position:
    • 618
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2896
  • centisome position:
    • 3.5737004
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRANS-RXN-125&oldid=13523"