Difference between revisions of "RXN-12729"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18206 RXN-18206] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydrogenas...")
 
(Created page with "Category:Gene == Gene Tiso_gene_3526 == * left end position: ** 6499 * transcription direction: ** POSITIVE * right end position: ** 8377 * centisome position: ** 39.38072...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18206 RXN-18206] ==
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== Gene Tiso_gene_3526 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 6499
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* common name:
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* transcription direction:
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** 3-isopropylmalate dehydrogenase
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** POSITIVE
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* right end position:
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** 8377
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* centisome position:
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** 39.38072   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PHOSGLYPHOS-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[CPDQT-37]][c] '''<=>''' 1 [[CPD-19490]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 NAD+[c] '''+''' 1 3-(4'-methylthio)butylmalate[c] '''<=>''' 1 3-isopropyl-7-(methylthio)-2-oxoheptanoate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-1042]]
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* [[Tiso_gene_2920]]
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* [[PWY66-399]]
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** EXPERIMENTAL_ANNOTATION
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* [[GLUCONEO-PWY]]
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***EC-NUMBER
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* [[GLYCOLYSIS]]
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== Pathways  ==
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* [[PWY-6901]]
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* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450]
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* [[SUCSYN-PWY]]
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** '''10''' reactions found over '''30''' reactions in the full pathway
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* [[P124-PWY]]
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== Reconstruction information  ==
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* [[PWY-6886]]
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* [[annotation]]:
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* [[CALVIN-PWY]]
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** [[pathwaytools]]:
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* [[ANAGLYCOLYSIS-PWY]]
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*** [[experimental_annotation]]
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* [[P122-PWY]]
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* [[P185-PWY]]
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* [[PWY-5484]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=6499}}
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{{#set: common name=3-isopropylmalate dehydrogenase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Tiso_gene_2920}}
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{{#set: right end position=8377}}
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{{#set: in pathway=PWYQT-4450}}
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{{#set: centisome position=39.38072    }}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=PHOSGLYPHOS-RXN}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: pathway associated=PWY-1042|PWY66-399|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|SUCSYN-PWY|P124-PWY|PWY-6886|CALVIN-PWY|ANAGLYCOLYSIS-PWY|P122-PWY|P185-PWY|PWY-5484|PWY-7003}}
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{{#set: reconstruction source=experimental_annotation}}
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Revision as of 16:36, 10 January 2018

Gene Tiso_gene_3526

  • left end position:
    • 6499
  • transcription direction:
    • POSITIVE
  • right end position:
    • 8377
  • centisome position:
    • 39.38072
  • Synonym(s):

Reactions associated

  • PHOSGLYPHOS-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12729&oldid=13749"