Difference between revisions of "CPD-809"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-622 PWY-622] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11839 RXN-11839] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridinesynthase...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-622 PWY-622] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11839 RXN-11839] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
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** starch biosynthesis
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** trna_pseudouridinesynthase
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** trna_pseudouridine_synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/5.4.99.25 EC-5.4.99.25]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''2''' reaction(s) found
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* With identifiers:
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** [[PHOSPHOGLUCMUT-RXN]]
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** 1 [[tRNA-uridine55]][c] '''=>''' 1 [[tRNA-pseudouridine55]][c]
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** [[PGLUCISOM-RXN]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 a uridine55 in tRNA[c] '''=>''' 1 a pseudouridine55 in tRNA[c]
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* '''8''' reaction(s) not found
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14371 RXN-14371]
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== Genes associated with this reaction ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14373 RXN-14373]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14372 RXN-14372]
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* [[Tiso_gene_4021]]
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** [http://metacyc.org/META/NEW-IMAGE?object=GLUC1PADENYLTRANS-RXN GLUC1PADENYLTRANS-RXN]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14378 RXN-14378]
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***AUTOMATED-NAME-MATCH
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14380 RXN-14380]
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* [[Tiso_gene_11913]]
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** [http://metacyc.org/META/NEW-IMAGE?object=GLYCOGENSYN-RXN GLYCOGENSYN-RXN]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14374 RXN-14374]
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_18959]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9833]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4020]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2988]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_19622]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PLANTCYC : PWY-622
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{{#set: direction=LEFT-TO-RIGHT}}
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* ARACYC:
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{{#set: common name=trna_pseudouridinesynthase}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-622 PWY-622]
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{{#set: common name=trna_pseudouridine_synthase}}
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{{#set: taxonomic range=TAX-2763}}
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{{#set: ec number=EC-5.4.99.25}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: gene associated=Tiso_gene_4021|Tiso_gene_11913|Tiso_gene_18959|Tiso_gene_9833|Tiso_gene_4020|Tiso_gene_2988|Tiso_gene_19622}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: in pathway=}}
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{{#set: common name=starch biosynthesis}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction found=2}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reaction not found=8}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:37, 10 January 2018

Reaction RXN-11839

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trna_pseudouridinesynthase
    • trna_pseudouridine_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-809&oldid=13805"